RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 ZNF202O95125 648 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 URODP06132 367 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 ACOT2P49753 483 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 SOX4Q06945 474 aaPredicted RBP16.53■□□□□ 0.24
PTCD1-204ENST00000430982 POSTNQ15063 836 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 ANGPT1Q15389 498 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 PTPN14Q15678 1187 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 ENOX2Q16206 610 aaKnown RBP16.53■□□□□ 0.24
PTCD1-204ENST00000430982 KRBA2Q6ZNG9 492 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 C18orf25Q96B23 403 aaPredicted RBP16.53■□□□□ 0.24
PTCD1-204ENST00000430982 UROC1Q96N76 676 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 GPR62Q9BZJ7 368 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 SEMA4AQ9H3S1 761 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 PLEKHA5Q9HAU0 1116 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 EXOC1Q9NV70 894 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 LIMD1Q9UGP4 676 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 STYXL1Q9Y6J8 313 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 OTOGLQ3ZCN5 2332 aa16.53■□□□□ 0.24
PTCD1-204ENST00000430982 SF3B1O75533 1304 aaKnown RBP eCLIP16.52■□□□□ 0.24
PTCD1-204ENST00000430982 LACTBL1A8MY62 500 aa16.52■□□□□ 0.24
PTCD1-204ENST00000430982 EIF3DO15371 548 aaKnown RBP eCLIP16.52■□□□□ 0.24
PTCD1-204ENST00000430982 B3GAT3O94766 335 aa16.52■□□□□ 0.24
PTCD1-204ENST00000430982 ADSSP30520 456 aa16.52■□□□□ 0.24
PTCD1-204ENST00000430982 GLUD2P49448 558 aa16.52■□□□□ 0.24
PTCD1-204ENST00000430982 CLCNKBP51801 687 aa16.52■□□□□ 0.24
PTCD1-204ENST00000430982 NOC3LQ8WTT2 800 aaKnown RBP16.52■□□□□ 0.24
PTCD1-204ENST00000430982 KIF12Q96FN5 646 aa16.52■□□□□ 0.24
PTCD1-204ENST00000430982 B3GALT6Q96L58 329 aa16.52■□□□□ 0.24
PTCD1-204ENST00000430982 SLC39A2Q9NP94 309 aa16.52■□□□□ 0.24
PTCD1-204ENST00000430982 MRPL17Q9NRX2 175 aaKnown RBP16.52■□□□□ 0.24
PTCD1-204ENST00000430982 DZANK1Q9NVP4 752 aa16.52■□□□□ 0.24
PTCD1-204ENST00000430982 CPSF3Q9UKF6 684 aaKnown RBP16.52■□□□□ 0.24
PTCD1-204ENST00000430982 TTC26A0AVF1 554 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 PODXLO00592 558 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 KLRC4O43908 158 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 EHHADHQ08426 723 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 USP41Q3LFD5 358 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 KMT5BQ4FZB7 885 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 ARMCX5Q6P1M9 558 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 DCLRE1AQ6PJP8 1040 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 EPM2AIP1Q7L775 607 aaPredicted RBP16.51■□□□□ 0.23
PTCD1-204ENST00000430982 NELFCDQ8IXH7 590 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 RNF168Q8IYW5 571 aaPredicted RBP16.51■□□□□ 0.23
PTCD1-204ENST00000430982 DTWD2Q8NBA8 298 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 FLCNQ8NFG4 579 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 SAAL1Q96ER3 474 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 DDX27Q96GQ7 796 aaKnown RBP16.51■□□□□ 0.23
PTCD1-204ENST00000430982 CCDC34Q96HJ3 373 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 RTP3Q9BQQ7 232 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 CBWD1Q9BRT8 395 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 EMILIN2Q9BXX0 1053 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 PCIF1Q9H4Z3 704 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 TUBGCP4Q9UGJ1 667 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 DUSP12Q9UNI6 340 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 SSX2IPQ9Y2D8 614 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 IRAK3Q9Y616 596 aa16.51■□□□□ 0.23
PTCD1-204ENST00000430982 TDRD15B5MCY1 1934 aaKnown RBP16.51■□□□□ 0.23
PTCD1-204ENST00000430982 UBE4BO95155 1302 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 GOLGA8IPA6NC78 632 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 GOLGA8JA6NMD2 632 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 EFEMP2O95967 443 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 RPN1P04843 607 aaKnown RBP16.5■□□□□ 0.23
PTCD1-204ENST00000430982 MYL1P05976 194 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 WEE2P0C1S8 567 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 GARTP22102 1010 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 IGFBP6P24592 240 aaPredicted RBP16.5■□□□□ 0.23
PTCD1-204ENST00000430982 ELAVL2Q12926 359 aaKnown RBP16.5■□□□□ 0.23
PTCD1-204ENST00000430982 UPP1Q16831 310 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 RARS2Q5T160 578 aaKnown RBP16.5■□□□□ 0.23
PTCD1-204ENST00000430982 FAM171A1Q5VUB5 890 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 CEP57Q86XR8 500 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 CD302Q8IX05 232 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 FEZF2Q8TBJ5 459 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 ZNF507Q8TCN5 953 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 SCFD1Q8WVM8 642 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 RIN2Q8WYP3 895 aaPredicted RBP16.5■□□□□ 0.23
PTCD1-204ENST00000430982 CCDC47Q96A33 483 aaKnown RBP16.5■□□□□ 0.23
PTCD1-204ENST00000430982 KLHL5Q96PQ7 755 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 FAM213AQ9BRX8 229 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 UBQLN1Q9UMX0 589 aaKnown RBP16.5■□□□□ 0.23
PTCD1-204ENST00000430982 TCHHQ07283 1943 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 FANCMQ8IYD8 2048 aa16.5■□□□□ 0.23
PTCD1-204ENST00000430982 TMEM189-UBE2V1I3L0A0 370 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 XPOTO43592 962 aaKnown RBP16.49■□□□□ 0.23
PTCD1-204ENST00000430982 LMNAP02545 664 aaKnown RBP16.49■□□□□ 0.23
PTCD1-204ENST00000430982 KLRC2P26717 231 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 RPL9P32969 192 aaKnown RBP16.49■□□□□ 0.23
PTCD1-204ENST00000430982 HOXD13P35453 343 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 GUCY2FP51841 1108 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 DSG1Q02413 1049 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 ATAT1Q5SQI0 421 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 KIAA0319Q5VV43 1072 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 JADE1Q6IE81 842 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 DGLUCYQ7Z3D6 616 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 FMR1NBQ8N0W7 255 aaPredicted RBP16.49■□□□□ 0.23
PTCD1-204ENST00000430982 TMEM130Q8N3G9 435 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 C12orf76Q8N812 135 aaPredicted RBP16.49■□□□□ 0.23
PTCD1-204ENST00000430982 ZSWIM2Q8NEG5 633 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 SLC22A17Q8WUG5 538 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms