RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 TBC1D4O60343 1298 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 GPR37L1O60883 481 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 PAPLNO95428 1278 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 ALADP13716 330 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 RPL17P18621 184 aaKnown RBP18.9■□□□□ 0.62
CTSD-203ENST00000429746 NDUFV1P49821 464 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 MRPL58Q14197 206 aaKnown RBP18.9■□□□□ 0.62
CTSD-203ENST00000429746 BMS1Q14692 1282 aaKnown RBP18.9■□□□□ 0.62
CTSD-203ENST00000429746 CLUL1Q15846 466 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 ANKRD54Q6NXT1 300 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 LLGL2Q6P1M3 1020 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 ARMCX5Q6P1M9 558 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 LILRA6Q6PI73 481 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.9■□□□□ 0.62
CTSD-203ENST00000429746 STXBP4Q6ZWJ1 553 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 GPD1LQ8N335 351 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 RIN2Q8WYP3 895 aaPredicted RBP18.9■□□□□ 0.62
CTSD-203ENST00000429746 ERCC4Q92889 916 aaPredicted RBP18.9■□□□□ 0.62
CTSD-203ENST00000429746 TTPALQ9BTX7 342 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 CD320Q9NPF0 282 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 DMAC2Q9NW81 257 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 FNIP2Q9P278 1114 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 CDH22Q9UJ99 828 aa18.9■□□□□ 0.62
CTSD-203ENST00000429746 SRGAP2BP0DMP2 458 aa18.89■□□□□ 0.61
CTSD-203ENST00000429746 COL9A1P20849 921 aa18.89■□□□□ 0.61
CTSD-203ENST00000429746 SSTR3P32745 418 aaPredicted RBP18.89■□□□□ 0.61
CTSD-203ENST00000429746 ZP2Q05996 745 aa18.89■□□□□ 0.61
CTSD-203ENST00000429746 TMEM132DQ14C87 1099 aa18.89■□□□□ 0.61
CTSD-203ENST00000429746 C9orf57Q5W0N0 161 aa18.89■□□□□ 0.61
CTSD-203ENST00000429746 KANK3Q6NY19 840 aa18.89■□□□□ 0.61
CTSD-203ENST00000429746 ELOA2Q8IYF1 753 aaPredicted RBP18.89■□□□□ 0.61
CTSD-203ENST00000429746 PLEKHO2Q8TD55 490 aa18.89■□□□□ 0.61
CTSD-203ENST00000429746 SUSD6Q92537 303 aa18.89■□□□□ 0.61
CTSD-203ENST00000429746 BORCS6Q96GS4 357 aa18.89■□□□□ 0.61
CTSD-203ENST00000429746 SUSD3Q96L08 255 aa18.89■□□□□ 0.61
CTSD-203ENST00000429746 EPHX3Q9H6B9 360 aa18.89■□□□□ 0.61
CTSD-203ENST00000429746 PDE11AQ9HCR9 933 aa18.89■□□□□ 0.61
CTSD-203ENST00000429746 RBAKQ9NYW8 714 aaPredicted RBP18.89■□□□□ 0.61
CTSD-203ENST00000429746 TRIOO75962 3097 aa18.88■□□□□ 0.61
CTSD-203ENST00000429746 M0QZQ0 153 aa18.88■□□□□ 0.61
CTSD-203ENST00000429746 KIAA0391O15091 583 aaKnown RBP18.88■□□□□ 0.61
CTSD-203ENST00000429746 IL18RAPO95256 599 aa18.88■□□□□ 0.61
CTSD-203ENST00000429746 LDHAP00338 332 aaKnown RBP18.88■□□□□ 0.61
CTSD-203ENST00000429746 SNRPFP62306 86 aaKnown RBP18.88■□□□□ 0.61
CTSD-203ENST00000429746 ELAVL2Q12926 359 aaKnown RBP18.88■□□□□ 0.61
CTSD-203ENST00000429746 ZCWPW2Q504Y3 356 aa18.88■□□□□ 0.61
CTSD-203ENST00000429746 FAM212AQ96EL1 285 aa18.88■□□□□ 0.61
CTSD-203ENST00000429746 MTRRQ9UBK8 725 aa18.88■□□□□ 0.61
CTSD-203ENST00000429746 DOCK6Q96HP0 2047 aa18.88■□□□□ 0.61
CTSD-203ENST00000429746 PSMD5Q16401 504 aa18.87■□□□□ 0.61
CTSD-203ENST00000429746 TMEM31Q5JXX7 168 aa18.87■□□□□ 0.61
CTSD-203ENST00000429746 SLC9A9Q8IVB4 645 aa18.87■□□□□ 0.61
CTSD-203ENST00000429746 SMYD4Q8IYR2 804 aaPredicted RBP18.87■□□□□ 0.61
CTSD-203ENST00000429746 C1orf127Q8N9H9 656 aa18.87■□□□□ 0.61
CTSD-203ENST00000429746 CASP10Q92851 521 aa18.87■□□□□ 0.61
CTSD-203ENST00000429746 SIX4Q9UIU6 781 aa18.87■□□□□ 0.61
CTSD-203ENST00000429746 PCDHA5Q9Y5H7 936 aa18.87■□□□□ 0.61
CTSD-203ENST00000429746 GOLGA6L4A6NEF3 574 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 C1RP00736 705 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 BMP6P22004 513 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 LILRA4P59901 499 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 SNRNP35Q16560 246 aaKnown RBP18.86■□□□□ 0.61
CTSD-203ENST00000429746 NT5DC4Q86YG4 428 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 GUF1Q8N442 669 aaKnown RBP18.86■□□□□ 0.61
CTSD-203ENST00000429746 C12orf76Q8N812 135 aaPredicted RBP18.86■□□□□ 0.61
CTSD-203ENST00000429746 BEST2Q8NFU1 509 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 OR5B17Q8NGF7 314 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 MFSD14AQ96MC6 490 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 IPO9Q96P70 1041 aaKnown RBP18.86■□□□□ 0.61
CTSD-203ENST00000429746 EMILIN2Q9BXX0 1053 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.86■□□□□ 0.61
CTSD-203ENST00000429746 DPP3Q9NY33 737 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 CGNQ9P2M7 1197 aaKnown RBP18.86■□□□□ 0.61
CTSD-203ENST00000429746 TRAF3IP3Q9Y228 551 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 SSX2IPQ9Y2D8 614 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 USP15Q9Y4E8 981 aaPredicted RBP18.86■□□□□ 0.61
CTSD-203ENST00000429746 ARIH1Q9Y4X5 557 aaPredicted RBP18.86■□□□□ 0.61
CTSD-203ENST00000429746 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.86■□□□□ 0.61
CTSD-203ENST00000429746 BACE2Q9Y5Z0 518 aa18.86■□□□□ 0.61
CTSD-203ENST00000429746 PDXKO00764 312 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 SYN3O14994 580 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 TGM5O43548 720 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 HOXB8P17481 243 aaPredicted RBP18.85■□□□□ 0.61
CTSD-203ENST00000429746 KLRC2P26717 231 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 CA8P35219 290 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 CYP2J2P51589 502 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 CYP24A1Q07973 514 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 COBLL1Q53SF7 1204 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 VARS2Q5ST30 1063 aaKnown RBP18.85■□□□□ 0.61
CTSD-203ENST00000429746 LMBRD2Q68DH5 695 aaPredicted RBP18.85■□□□□ 0.61
CTSD-203ENST00000429746 KIAA1841Q6NSI8 718 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 CEP57Q86XR8 500 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 XXYLT1Q8NBI6 393 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 LRFN3Q9BTN0 628 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 PCDHB8Q9UN66 801 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 MAPK8IP1Q9UQF2 711 aa18.85■□□□□ 0.61
CTSD-203ENST00000429746 NOTCH4Q99466 2003 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 ZNF233A6NK53 670 aa18.84■□□□□ 0.61
CTSD-203ENST00000429746 XPOTO43592 962 aaKnown RBP18.84■□□□□ 0.61
CTSD-203ENST00000429746 ADH1AP07327 375 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms