RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 RSL24D1Q9UHA3 163 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 SIK3Q9Y2K2 1263 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 TLL2Q9Y6L7 1015 aa9.37□□□□□ -0.91
CDC42BPA-206ENST00000429440 NWD2Q9ULI1 1742 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 DENRO43583 198 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 GH1P01241 217 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 CD48P09326 243 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 RXRAP19793 462 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 LONP1P36776 959 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 ACTR3P61158 418 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 NOP14P78316 857 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 HSPA14Q0VDF9 509 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 KYNUQ16719 465 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 Q3C1V9 767 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 HGSNATQ68CP4 663 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZDHHC24Q6UX98 284 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 CCDC81Q6ZN84 652 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 TRMT10CQ7L0Y3 403 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 MMAAQ8IVH4 418 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 AHI1Q8N157 1196 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 CPSF7Q8N684 471 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 ATP6V0D2Q8N8Y2 350 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 CALML6Q8TD86 181 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 PPP4R1Q8TF05 950 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 NOC4LQ9BVI4 516 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 SEZ6LQ9BYH1 1024 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 CELF4Q9BZC1 486 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 AS3MTQ9HBK9 375 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 RIC8AQ9NPQ8 531 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 CNGB3Q9NQW8 809 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 LZTS1Q9Y250 596 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 A0A0G2JLW4 131 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 CFAP69A5D8W1 941 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 TRIM49BA6NDI0 452 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 LRRC53A6NM62 1247 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 EYA2O00167 538 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 XPOTO43592 962 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 ITM2AO43736 263 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 PEX1O43933 1283 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 EDF1O60869 148 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 TCEA3O75764 348 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 HSPA1AP0DMV8 641 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 HSPA1BP0DMV9 641 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 HNRNPFP52597 415 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 AP3M2P53677 418 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 PLTPP55058 493 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 COL19A1Q14993 1142 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 SLC9C1Q4G0N8 1177 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 C10orf76Q5T2E6 689 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 PDXDC2PQ6P474 469 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 MIER3Q7Z3K6 550 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 METTL13Q8N6R0 699 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 LILRB4Q8NHJ6 448 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 NCOA7Q8NI08 942 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 FAM172AQ8WUF8 416 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 BAP1Q92560 729 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 CDK5RAP3Q96JB5 506 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 AASDHPPTQ9NRN7 309 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 TAS2R1Q9NYW7 299 aa9.36□□□□□ -0.91
CDC42BPA-206ENST00000429440 ECM29Q5VYK3 1845 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 TNFAIP8O95379 198 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 KRT75O95678 551 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 CHEK2O96017 543 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 ENO2P09104 434 aaPredicted RBP9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 ITGA4P13612 1032 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 AMPD1P23109 780 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 IL15P40933 162 aaPredicted RBP9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 THOP1P52888 689 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 ANTXR2P58335 489 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 LRRC63Q05C16 580 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 APOFQ13790 326 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZNF568Q3ZCX4 644 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 KIAA1755Q5JYT7 1200 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 LVRNQ6Q4G3 990 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 RFPL4BQ6ZWI9 263 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 RRAGAQ7L523 313 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 CSGALNACT2Q8N6G5 542 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 FBXO25Q8TCJ0 367 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 MRPL1Q9BYD6 325 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 BLZF1Q9H2G9 400 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 CYLDQ9NQC7 956 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 IGSF9Q9P2J2 1179 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 RABGEF1Q9UJ41 708 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 CLEC11AQ9Y240 323 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 ZBTB1Q9Y2K1 713 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 GDAQ9Y2T3 454 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 RABGAP1Q9Y3P9 1069 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 MAD1L1Q9Y6D9 718 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 ADGRA3Q8IWK6 1321 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 AKAP11Q9UKA4 1901 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 TRIM75PA6NK02 468 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 K7EPI3 171 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 KIAA0391O15091 583 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 TSPAN1O60635 241 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 SPAG7O75391 227 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 CIAO1O76071 339 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 HAUS5O94927 633 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 SERPING1P05155 500 aa9.35□□□□□ -0.91
CDC42BPA-206ENST00000429440 RARBP10826 455 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms