RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 SLC12A6Q9UHW9 1150 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 TMEM59LQ9UK28 342 aa8.56□□□□□ -1.04
HPS4-205ENST00000429411 ZMYM2Q9UBW7 1377 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 AOC2O75106 756 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 AGTP01019 485 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 ZSCAN5DPP0CG00 497 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 VCAM1P19320 739 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 PSMC5P62195 406 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 ORC1Q13415 861 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 CLUL1Q15846 466 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 CCDC6Q16204 474 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 FAM160B2Q86V87 743 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 MCF2L2Q86YR7 1114 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 ZBED8Q8IZ13 594 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 DAW1Q8N136 415 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 RNF146Q9NTX7 359 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 KLF15Q9UIH9 416 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 SERPINA10Q9UK55 444 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 TRIM33Q9UPN9 1127 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 TMX2Q9Y320 296 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 K7ERI5 159 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 PPFIA2O75334 1257 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 FSBPO95073 299 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 DRD4P21917 467 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 GNA15P30679 374 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 ATP11AP98196 1134 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 BBS9Q3SYG4 887 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 ARMC9Q7Z3E5 817 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 RASGEF1CQ8N431 466 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 CCDC89Q8N998 374 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 FBF1Q8TES7 1133 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 GRK7Q8WTQ7 553 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 OTUD5Q96G74 571 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 SNF8Q96H20 258 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 RBM15Q96T37 977 aaKnown RBP eCLIP8.55□□□□□ -1.042e-6■■■■□ 23.7
HPS4-205ENST00000429411 ETNK1Q9HBU6 452 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 COL20A1Q9P218 1284 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 HERC5Q9UII4 1024 aaKnown RBP8.55□□□□□ -1.04
HPS4-205ENST00000429411 TBX20Q9UMR3 447 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 STXBP5LQ9Y2K9 1186 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 MYH11P35749 1972 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 MKI67P46013 3256 aaKnown RBP8.55□□□□□ -1.04
HPS4-205ENST00000429411 PFASO15067 1338 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 H0YGN5 161 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 O00370 1275 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 IGF2BP3O00425 579 aaKnown RBP eCLIP8.55□□□□□ -1.04
HPS4-205ENST00000429411 TRPA1O75762 1119 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 MAP3K6O95382 1288 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 NOP14P78316 857 aaKnown RBP8.55□□□□□ -1.04
HPS4-205ENST00000429411 FMO1Q01740 532 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 PPP2R5CQ13362 524 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 BMT2Q1RMZ1 405 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 DEFB115Q30KQ5 88 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 SNRNP48Q6IEG0 339 aaKnown RBP8.55□□□□□ -1.04
HPS4-205ENST00000429411 SLFN11Q7Z7L1 901 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 THNSL1Q8IYQ7 743 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 ZKSCAN4Q969J2 545 aaPredicted RBP8.55□□□□□ -1.04
HPS4-205ENST00000429411 ZBTB45Q96K62 511 aaPredicted RBP8.55□□□□□ -1.04
HPS4-205ENST00000429411 MSTO1Q9BUK6 570 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 IDI2Q9BXS1 227 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 CALN1Q9BXU9 219 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 IQCGQ9H095 443 aaKnown RBP8.55□□□□□ -1.04
HPS4-205ENST00000429411 POLR3FQ9H1D9 316 aaPredicted RBP8.55□□□□□ -1.04
HPS4-205ENST00000429411 CXorf56Q9H5V9 222 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 FEM1BQ9UK73 627 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 NFS1Q9Y697 457 aa8.55□□□□□ -1.04
HPS4-205ENST00000429411 TAF1LQ8IZX4 1826 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 BTNL10A8MVZ5 291 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 F5H423 210 aaPredicted RBP8.54□□□□□ -1.04
HPS4-205ENST00000429411 CES2O00748 559 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 ENTPD3O75355 529 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 SKAP2O75563 359 aaPredicted RBP8.54□□□□□ -1.04
HPS4-205ENST00000429411 RARGP13631 454 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 ETS1P14921 441 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 ANXA13P27216 316 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 ARSEP51690 589 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 BASP1P80723 227 aaKnown RBP8.54□□□□□ -1.04
HPS4-205ENST00000429411 CDR2Q01850 454 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 AUHQ13825 339 aaKnown RBP8.54□□□□□ -1.04
HPS4-205ENST00000429411 ERMARDQ5T6L9 678 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 TATDN1Q6P1N9 297 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 RFX8Q6ZV50 586 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 SLC17A8Q8NDX2 589 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 LRRC8CQ8TDW0 803 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 SLC10A4Q96EP9 437 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 ELP3Q9H9T3 547 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 NOD2Q9HC29 1040 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 GTF3C4Q9UKN8 822 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 R3HDM2Q9Y2K5 976 aaKnown RBP8.54□□□□□ -1.04
HPS4-205ENST00000429411 SMCHD1A6NHR9 2005 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 NEBLO76041 1014 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 HLA-DRAP01903 254 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 VIL1P09327 827 aaKnown RBP8.54□□□□□ -1.04
HPS4-205ENST00000429411 KCNJ2P63252 427 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 IL9RQ01113 521 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 KIF22Q14807 665 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 KCNT1Q5JUK3 1230 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 SCYL2Q6P3W7 929 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 ZDHHC24Q6UX98 284 aa8.54□□□□□ -1.04
HPS4-205ENST00000429411 ARHGEF18Q6ZSZ5 1173 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms