RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 TMEM63BQ5T3F8 832 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 ANKRD20A1Q5TYW2 823 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 ANKRD20A3Q5VUR7 823 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 NSMFQ6X4W1 530 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 OTUD6AQ7L8S5 288 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 SPICE1Q8N0Z3 855 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 GALNT15Q8N3T1 639 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 MGARPQ8TDB4 240 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 DYDC1Q8WWB3 177 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 MAIP1Q8WWC4 291 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
CDH13-202ENST00000428848 TRAIPQ9BWF2 469 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 PLVAPQ9BX97 442 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 OSBPL1AQ9BXW6 950 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 AVENQ9NQS1 362 aaPredicted RBP9.39□□□□□ -0.91
CDH13-202ENST00000428848 GGT7Q9UJ14 662 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 ZHX2Q9Y6X8 837 aa9.39□□□□□ -0.91
CDH13-202ENST00000428848 GOLGB1Q14789 3259 aaKnown RBP9.38□□□□□ -0.91
CDH13-202ENST00000428848 FOXO6A8MYZ6 492 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 GH1P01241 217 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 ASNSP08243 561 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 KRT16P08779 473 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 BRAFP15056 766 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 ITGB5P18084 799 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 ADSSP30520 456 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 ABL2P42684 1182 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 MRPS35P82673 323 aaKnown RBP9.38□□□□□ -0.91
CDH13-202ENST00000428848 PTP4A2Q12974 167 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 KLF1Q13351 362 aaPredicted RBP9.38□□□□□ -0.91
CDH13-202ENST00000428848 TNFAIP1Q13829 316 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 LBRQ14739 615 aaKnown RBP9.38□□□□□ -0.91
CDH13-202ENST00000428848 MTFR1Q15390 333 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 CLEC16AQ2KHT3 1053 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 SGSM1Q2NKQ1 1148 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 KRT39Q6A163 491 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 MTHFD1LQ6UB35 978 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 HAUS6Q7Z4H7 955 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 PPM1KQ8N3J5 372 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 SAMD3Q8N6K7 520 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 ATL2Q8NHH9 583 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 GRK7Q8WTQ7 553 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 KLHL29Q96CT2 875 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 IFT74Q96LB3 600 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 RMDN2Q96LZ7 410 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 ASIC3Q9UHC3 531 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 PNMA3Q9UL41 463 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 ZBTB21Q9ULJ3 1066 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDH13-202ENST00000428848 MROH7Q68CQ1 1323 aa9.38□□□□□ -0.91
CDH13-202ENST00000428848 LRRD1A4D1F6 860 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 E7ENQ6 273 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 MAGEB2O15479 319 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 CDH16O75309 829 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 TAC1P20366 129 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 CNGA1P29973 690 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 SLC1A1P43005 524 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 CTCFP49711 727 aaPredicted RBP9.37□□□□□ -0.91
CDH13-202ENST00000428848 LACTBP83111 547 aaPredicted RBP9.37□□□□□ -0.91
CDH13-202ENST00000428848 ATP11AP98196 1134 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 CENPCQ03188 943 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 TNIP1Q15025 636 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 MAEAQ7L5Y9 396 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 MIER3Q7Z3K6 550 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 CBWD2Q8IUF1 395 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 ZNF784Q8NCA9 323 aaPredicted RBP9.37□□□□□ -0.91
CDH13-202ENST00000428848 ACER1Q8TDN7 264 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 ATG4AQ8WYN0 398 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 MAML1Q92585 1016 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 GRAMD1AQ96CP6 724 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 NAF1Q96HR8 494 aaKnown RBP9.37□□□□□ -0.91
CDH13-202ENST00000428848 FBXL18Q96ME1 805 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 GMLQ99445 158 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 TIPINQ9BVW5 301 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 TMEM8AQ9HCN3 771 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 NAALADL1Q9UQQ1 740 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 RAD17O75943 681 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 GAS8O95995 478 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 ABHD2P08910 425 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 FOXN2P32314 431 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 MSH2P43246 934 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 HSD17B4P51659 736 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 SNX1Q13596 522 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 STAT4Q14765 748 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 TAF11Q15544 211 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 SNRNP35Q16560 246 aaKnown RBP9.37□□□□□ -0.91
CDH13-202ENST00000428848 CCNG2Q16589 344 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 TBC1D25Q3MII6 688 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 CCDC174Q6PII3 467 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 NIPA1Q7RTP0 329 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 ECHDC2Q86YB7 292 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 LMNTD2Q8IXW0 634 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 MCOLN2Q8IZK6 566 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 ANKRD42Q8N9B4 389 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 TMC2Q8TDI7 906 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 ZNF526Q8TF50 670 aaPredicted RBP9.37□□□□□ -0.91
CDH13-202ENST00000428848 JDP2Q8WYK2 163 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 MFSD14AQ96MC6 490 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 TGS1Q96RS0 853 aaKnown RBP9.37□□□□□ -0.91
CDH13-202ENST00000428848 IWS1Q96ST2 819 aa9.37□□□□□ -0.91
CDH13-202ENST00000428848 MLXIPLQ9NP71 852 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms