RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 RIN2Q8WYP3 895 aaPredicted RBP15.73■□□□□ 0.11
SGCE-204ENST00000428696 VN1R3Q9BXE9 311 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 SRRTQ9BXP5 876 aaKnown RBP15.73■□□□□ 0.11
SGCE-204ENST00000428696 NGRNQ9NPE2 291 aaKnown RBP15.73■□□□□ 0.11
SGCE-204ENST00000428696 INTS13Q9NVM9 706 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 PTPRJQ12913 1337 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 HIDE1A8MVS5 230 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 SOD2P04179 222 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 NRIP1P48552 1158 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 GLUD2P49448 558 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 RBP5P82980 135 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 BFSP1Q12934 665 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 TRPC3Q13507 836 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 SKOR2Q2VWA4 1001 aaPredicted RBP15.72■□□□□ 0.11
SGCE-204ENST00000428696 TCEAL5Q5H9L2 206 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 DCAF17Q5H9S7 520 aaPredicted RBP15.72■□□□□ 0.11
SGCE-204ENST00000428696 WDR49Q8IV35 697 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 GLYCTKQ8IVS8 523 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 MRPL43Q8N983 215 aaKnown RBP15.72■□□□□ 0.11
SGCE-204ENST00000428696 MAFAQ8NHW3 353 aaPredicted RBP15.72■□□□□ 0.11
SGCE-204ENST00000428696 PPP2R3CQ969Q6 453 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 CGRRF1Q99675 332 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 DUSP9Q99956 384 aaKnown RBP15.72■□□□□ 0.11
SGCE-204ENST00000428696 NSUN3Q9H649 340 aaKnown RBP15.72■□□□□ 0.11
SGCE-204ENST00000428696 LMCD1Q9NZU5 365 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 STK39Q9UEW8 545 aa15.72■□□□□ 0.11
SGCE-204ENST00000428696 TIMM13Q9Y5L4 95 aaPredicted RBP15.72■□□□□ 0.11
SGCE-204ENST00000428696 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.72■□□□□ 0.11
SGCE-204ENST00000428696 LRRIQ3A6PVS8 624 aaPredicted RBP15.71■□□□□ 0.11
SGCE-204ENST00000428696 TRIM49P0CI25 452 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 TRIM49CP0CI26 452 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 CTSAP10619 480 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 KLRC2P26717 231 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 LRPAP1P30533 357 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 ELAVL2Q12926 359 aaKnown RBP15.71■□□□□ 0.11
SGCE-204ENST00000428696 NFIL3Q16649 462 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 KLHL40Q2TBA0 621 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 TIGD5Q53EQ6 642 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 PDE12Q6L8Q7 609 aaKnown RBP15.71■□□□□ 0.11
SGCE-204ENST00000428696 TTI2Q6NXR4 508 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 LLGL2Q6P1M3 1020 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 INTS8Q75QN2 995 aaKnown RBP15.71■□□□□ 0.11
SGCE-204ENST00000428696 TRAPPC11Q7Z392 1133 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 C1orf127Q8N9H9 656 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 PLEKHO2Q8TD55 490 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 PARD3BQ8TEW8 1205 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 TTPALQ9BTX7 342 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.71■□□□□ 0.11
SGCE-204ENST00000428696 RWDD2AQ9UIY3 292 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 ITGA11Q9UKX5 1188 aa15.71■□□□□ 0.11
SGCE-204ENST00000428696 TDRD15B5MCY1 1934 aaKnown RBP15.71■□□□□ 0.11
SGCE-204ENST00000428696 FGFR1OPO95684 399 aaKnown RBP15.7■□□□□ 0.1
SGCE-204ENST00000428696 ATXN8OSP0DMR3 200 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 RPL17P18621 184 aaKnown RBP15.7■□□□□ 0.1
SGCE-204ENST00000428696 GCLMP48507 274 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 ARPP19P56211 112 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 LILRA4P59901 499 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 NFKBIBQ15653 356 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 SCARA3Q6AZY7 606 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 PRSS55Q6UWB4 352 aaPredicted RBP15.7■□□□□ 0.1
SGCE-204ENST00000428696 ADGRD2Q7Z7M1 963 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 ZNF516Q92618 1163 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 HERC2P3Q9BVR0 1158 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 EMILIN2Q9BXX0 1053 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 ZBP1Q9H171 429 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 ANO10Q9NW15 660 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 ARMCX3Q9UH62 379 aaPredicted RBP15.7■□□□□ 0.1
SGCE-204ENST00000428696 SSX2IPQ9Y2D8 614 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 STXBP5LQ9Y2K9 1186 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 CITO14578 2027 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 NLRC5Q86WI3 1866 aa15.7■□□□□ 0.1
SGCE-204ENST00000428696 TRIP11Q15643 1979 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 C2orf71A6NGG8 1288 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 TMEM189-UBE2V1I3L0A0 370 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 PIRO00625 290 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 CYB561D2O14569 222 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 SPTLC1O15269 473 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 CST3P01034 146 aaPredicted RBP15.69■□□□□ 0.1
SGCE-204ENST00000428696 TKTP29401 623 aaKnown RBP15.69■□□□□ 0.1
SGCE-204ENST00000428696 GTF2F1P35269 517 aaKnown RBP eCLIP15.69■□□□□ 0.1
SGCE-204ENST00000428696 TAF6P49848 677 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 MYO1EQ12965 1108 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 STX1AQ16623 288 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 SV2CQ496J9 727 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 HSP90AA4PQ58FG1 418 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 RTP2Q5QGT7 225 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 CD300LGQ6UXG3 332 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 FILIP1Q7Z7B0 1213 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 PALB2Q86YC2 1186 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 TMC2Q8TDI7 906 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 TMEM174Q8WUU8 243 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 HPDLQ96IR7 371 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 SENP8Q96LD8 212 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 CEP63Q96MT8 703 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 KIAA1671Q9BY89 1806 aa15.69■□□□□ 0.1
SGCE-204ENST00000428696 ANO9A1A5B4 782 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 KPNA7A9QM74 516 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 FSCN2O14926 492 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 LETM1O95202 739 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms