RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 ASB7Q9H672 318 aa22.43■■□□□ 1.18
HSPG2-205ENST00000427897 SORCS3Q9UPU3 1222 aa22.43■■□□□ 1.18
HSPG2-205ENST00000427897 ATP6V1DQ9Y5K8 247 aa22.43■■□□□ 1.18
HSPG2-205ENST00000427897 PDCD11Q14690 1871 aaKnown RBP22.43■■□□□ 1.18
HSPG2-205ENST00000427897 PRRG1O14668 218 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 LRPAP1P30533 357 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 MTMR3Q13615 1198 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 ZBTB6Q15916 424 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 UVSSAQ2YD98 709 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 ZNF280DQ6N043 979 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 SLC7A14Q8TBB6 771 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 FEZF2Q8TBJ5 459 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 SPATA32Q96LK8 384 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 MFSD14AQ96MC6 490 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 FAM213AQ9BRX8 229 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 RHOBTB2Q9BYZ6 727 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 MAGEF1Q9HAY2 307 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 KBTBD4Q9NVX7 518 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 RCOR1Q9UKL0 485 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 PCDHB8Q9UN66 801 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 DERAQ9Y315 318 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 STYXL1Q9Y6J8 313 aa22.42■■□□□ 1.18
HSPG2-205ENST00000427897 VWA8A3KMH1 1905 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 TMEM221A6NGB7 291 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 M0R296 226 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 CCL16O15467 120 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 FAM189A1O60320 539 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 PPP1R37O75864 691 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 PRPF6O94906 941 aaKnown RBP22.41■■□□□ 1.18
HSPG2-205ENST00000427897 KRT85P78386 507 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 SIGLEC14Q08ET2 396 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 KCNA1Q09470 495 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 E2F4Q16254 413 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 SPATA1Q5VX52 437 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 PBXIP1Q96AQ6 731 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 TRIM9Q9C026 710 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 C2orf16Q68DN1 1984 aa22.41■■□□□ 1.18
HSPG2-205ENST00000427897 ARHGEF37A1IGU5 675 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 FRMD3A2A2Y4 597 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 IL18RAPO95256 599 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 LRG1P02750 347 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 ASGR2P07307 311 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 PAX3P23760 479 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 GUCY2FP51841 1108 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 CASP5P51878 434 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 YWHAHQ04917 246 aaPredicted RBP22.4■■□□□ 1.18
HSPG2-205ENST00000427897 RESP18Q5W5W9 173 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 ARMCX5Q6P1M9 558 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 RSPO2Q6UXX9 243 aaPredicted RBP22.4■■□□□ 1.18
HSPG2-205ENST00000427897 GET4Q7L5D6 327 aaPredicted RBP22.4■■□□□ 1.18
HSPG2-205ENST00000427897 GRASPQ7Z6J2 395 aaPredicted RBP22.4■■□□□ 1.18
HSPG2-205ENST00000427897 UBALD2Q8IYN6 164 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 ZNF461Q8TAF7 563 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 ZNF707Q96C28 371 aaPredicted RBP22.4■■□□□ 1.18
HSPG2-205ENST00000427897 STRA6Q9BX79 667 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 IKZF4Q9H2S9 585 aa22.4■■□□□ 1.18
HSPG2-205ENST00000427897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.4■■□□□ 1.18
HSPG2-205ENST00000427897 ADRB2P07550 413 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 NFICP08651 508 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 CPB1P15086 417 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 GARTP22102 1010 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 FSHRP23945 695 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 HOXA9P31269 272 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 ANP32AP39687 249 aaKnown RBP22.39■■□□□ 1.17
HSPG2-205ENST00000427897 AFMP43652 599 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 POU5F1Q01860 360 aaKnown RBP22.39■■□□□ 1.17
HSPG2-205ENST00000427897 SLC8B1Q6J4K2 584 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 RTL10Q7L3V2 364 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 SUGP1Q8IWZ8 645 aaKnown RBP22.39■■□□□ 1.17
HSPG2-205ENST00000427897 SAAL1Q96ER3 474 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 PCIF1Q9H4Z3 704 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 RAPGEFL1Q9UHV5 662 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 FBXL5Q9UKA1 691 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 KCNH3Q9ULD8 1083 aa22.39■■□□□ 1.17
HSPG2-205ENST00000427897 R3HCC1Q9Y3T6 440 aaKnown RBP22.39■■□□□ 1.17
HSPG2-205ENST00000427897 ROR1Q01973 937 aa22.38■■□□□ 1.17
HSPG2-205ENST00000427897 HFE2Q6ZVN8 426 aa22.38■■□□□ 1.17
HSPG2-205ENST00000427897 CACTINQ8WUQ7 758 aaKnown RBP22.38■■□□□ 1.17
HSPG2-205ENST00000427897 C7orf25Q9BPX7 421 aa22.38■■□□□ 1.17
HSPG2-205ENST00000427897 OXCT2Q9BYC2 517 aaPredicted RBP22.38■■□□□ 1.17
HSPG2-205ENST00000427897 CYP4F11Q9HBI6 524 aa22.38■■□□□ 1.17
HSPG2-205ENST00000427897 DPP3Q9NY33 737 aa22.38■■□□□ 1.17
HSPG2-205ENST00000427897 C2CD2Q9Y426 696 aa22.38■■□□□ 1.17
HSPG2-205ENST00000427897 TIMM13Q9Y5L4 95 aaPredicted RBP22.38■■□□□ 1.17
HSPG2-205ENST00000427897 DENND4AQ7Z401 1863 aa22.37■■□□□ 1.17
HSPG2-205ENST00000427897 GOLGA8IPA6NC78 632 aa22.37■■□□□ 1.17
HSPG2-205ENST00000427897 GOLGA8JA6NMD2 632 aa22.37■■□□□ 1.17
HSPG2-205ENST00000427897 ODC1P11926 461 aa22.37■■□□□ 1.17
HSPG2-205ENST00000427897 ADSSP30520 456 aa22.37■■□□□ 1.17
HSPG2-205ENST00000427897 C9orf57Q5W0N0 161 aa22.37■■□□□ 1.17
HSPG2-205ENST00000427897 METTL23Q86XA0 190 aa22.37■■□□□ 1.17
HSPG2-205ENST00000427897 ELMOD1Q8N336 334 aa22.37■■□□□ 1.17
HSPG2-205ENST00000427897 TMEM130Q8N3G9 435 aa22.37■■□□□ 1.17
HSPG2-205ENST00000427897 HPS3Q969F9 1004 aa22.37■■□□□ 1.17
HSPG2-205ENST00000427897 BLZF1Q9H2G9 400 aa22.37■■□□□ 1.17
HSPG2-205ENST00000427897 RBAKQ9NYW8 714 aaPredicted RBP22.37■■□□□ 1.17
HSPG2-205ENST00000427897 IGSF9Q9P2J2 1179 aa22.37■■□□□ 1.17
HSPG2-205ENST00000427897 M0QZQ0 153 aa22.36■■□□□ 1.17
HSPG2-205ENST00000427897 KIAA0391O15091 583 aaKnown RBP22.36■■□□□ 1.17
HSPG2-205ENST00000427897 EXTL3O43909 919 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms