RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 VAV3Q9UKW4 847 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 SLC12A4Q9UP95 1085 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 NRXN2Q9P2S2 1712 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 SRRM3A6NNA2 597 aaPredicted RBP16.95■□□□□ 0.3
PKP4-205ENST00000426248 K7ERI5 159 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 KLRC4O43908 158 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 EIF3BP55884 814 aaKnown RBP16.95■□□□□ 0.3
PKP4-205ENST00000426248 VPS36Q86VN1 386 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 UCMAQ8WVF2 138 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 FAM49AQ9H0Q0 323 aaPredicted RBP16.95■□□□□ 0.3
PKP4-205ENST00000426248 SEMA6BQ9H3T3 888 aa16.95■□□□□ 0.3
PKP4-205ENST00000426248 DYNC1LI2O43237 492 aaPredicted RBP16.94■□□□□ 0.3
PKP4-205ENST00000426248 TPD52L2O43399 206 aaKnown RBP16.94■□□□□ 0.3
PKP4-205ENST00000426248 RARAP10276 462 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 ERP27Q96DN0 273 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 HIC2Q96JB3 615 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 NEUROG2Q9H2A3 272 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 DNAJC17Q9NVM6 304 aaKnown RBP16.94■□□□□ 0.3
PKP4-205ENST00000426248 WDR35Q9P2L0 1181 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 HAO1Q9UJM8 370 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 NOC2LQ9Y3T9 749 aaKnown RBP16.94■□□□□ 0.3
PKP4-205ENST00000426248 BAG2O95816 211 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 FGFR4P22455 802 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 PSMC2P35998 433 aaKnown RBP16.94■□□□□ 0.3
PKP4-205ENST00000426248 OSTNP61366 133 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 VWA3BQ502W6 1294 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 XKR3Q5GH77 459 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 ZNF746Q6NUN9 644 aaPredicted RBP16.94■□□□□ 0.3
PKP4-205ENST00000426248 MCPH1Q8NEM0 835 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 DNERQ8NFT8 737 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 POLR3FQ9H1D9 316 aaPredicted RBP16.94■□□□□ 0.3
PKP4-205ENST00000426248 BCAS3Q9H6U6 928 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 PREBQ9HCU5 417 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 NKX1-2Q9UD57 310 aaPredicted RBP16.94■□□□□ 0.3
PKP4-205ENST00000426248 ASAP2O43150 1006 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 TNFRSF8P28908 595 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 RASSF2P50749 326 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 MEA1Q16626 185 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 MTHFD1LQ6UB35 978 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 SCFD2Q8WU76 684 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 COPS5Q92905 334 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 CARD9Q9H257 536 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 STOML1Q9UBI4 398 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 ARL2BPQ9Y2Y0 163 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 BZW2Q9Y6E2 419 aaKnown RBP16.94■□□□□ 0.3
PKP4-205ENST00000426248 KIAA1551Q9HCM1 1747 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
PKP4-205ENST00000426248 SEPT7Q16181 437 aaKnown RBP16.94■□□□□ 0.3
PKP4-205ENST00000426248 CCNJLQ8IV13 435 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 FAM133AQ8N9E0 248 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 HSD17B14Q9BPX1 270 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 PHACTR1Q9C0D0 580 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 RBPJLQ9UBG7 517 aa16.94■□□□□ 0.3
PKP4-205ENST00000426248 MYPNQ86TC9 1320 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 C5orf60A6NFR6 353 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 PMS2P54278 862 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 KIF22Q14807 665 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 ZBTB8OSQ8IWT0 167 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 VPS52Q8N1B4 723 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 LRRC71Q8N4P6 559 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 F8VZ95 297 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 TXNDC9O14530 226 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 RARRES1P49788 294 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 SLC12A3P55017 1021 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 ZBTB16Q05516 673 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 TTI2Q6NXR4 508 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 ZBTB33Q86T24 672 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 SAMD3Q8N6K7 520 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 AP5M1Q9H0R1 490 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 METTL14Q9HCE5 456 aaKnown RBP16.93■□□□□ 0.3
PKP4-205ENST00000426248 ACSL3O95573 720 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 ITGA4P13612 1032 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 CALB2P22676 271 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 PTDSS1P48651 473 aaKnown RBP16.93■□□□□ 0.3
PKP4-205ENST00000426248 PEX5P50542 639 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 KCNA1Q09470 495 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 SLC29A2Q14542 456 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 EXOC3L4Q17RC7 722 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 SPATA20Q8TB22 786 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 EPS8L3Q8TE67 593 aaKnown RBP16.93■□□□□ 0.3
PKP4-205ENST00000426248 LRRC15Q8TF66 581 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 NAP1L3Q99457 506 aaPredicted RBP16.93■□□□□ 0.3
PKP4-205ENST00000426248 RNPEPL1Q9HAU8 725 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 RASAL2Q9UJF2 1139 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 DAAM1Q9Y4D1 1078 aa16.93■□□□□ 0.3
PKP4-205ENST00000426248 A6NHS1 94 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 ENTPD5O75356 428 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 FGGP02679 453 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 RHPN2Q8IUC4 686 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 SCFD1Q8WVM8 642 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 TMEM206Q9H813 350 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 TYW1Q9NV66 732 aaKnown RBP16.92■□□□□ 0.3
PKP4-205ENST00000426248 PCMTD2Q9NV79 361 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 TRIM49P0CI25 452 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 TRIM49CP0CI26 452 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 CASP5P51878 434 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 DNAJC19Q96DA6 116 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 TGS1Q96RS0 853 aaKnown RBP16.92■□□□□ 0.3
PKP4-205ENST00000426248 CYTH2Q99418 400 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 PLAGL2Q9UPG8 496 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms