RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 LIN9Q5TKA1 542 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 ZNF449Q6P9G9 518 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 GLIS1Q8NBF1 620 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 SLCO2A1Q92959 643 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 ACSF2Q96CM8 615 aaPredicted RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 ERP27Q96DN0 273 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 FNBP1Q96RU3 617 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 FHDC1Q9C0D6 1143 aaPredicted RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 EBF2Q9HAK2 575 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 FEM1BQ9UK73 627 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 COQ4Q9Y3A0 265 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 CTDP1Q9Y5B0 961 aaPredicted RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 ZNF831Q5JPB2 1677 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 WDR91A4D1P6 747 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 TLR3O15455 904 aaKnown RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 PROSCO94903 275 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 CCND1P24385 295 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 TARSP26639 723 aaKnown RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 SLC1A1P43005 524 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 NCKAP1LP55160 1127 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 RNASELQ05823 741 aaKnown RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 MTM1Q13496 603 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 MTFR1Q15390 333 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 DLGAP5Q15398 846 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 BRDTQ58F21 947 aaPredicted RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 TMEM270Q6UE05 265 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 ANKS1BQ7Z6G8 1248 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 RHOT1Q8IXI2 618 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 TMEM237Q96Q45 408 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 ZNF341Q9BYN7 854 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 ARHGEF3Q9NR81 526 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 TBC1D22BQ9NU19 505 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 PRKAG3Q9UGI9 489 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 ZBTB12Q9Y330 459 aaPredicted RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 NEU2Q9Y3R4 380 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 PCDHB4Q9Y5E5 795 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 PCDHB2Q9Y5E7 798 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 H0YIN7 160 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 MAPK13O15264 365 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 CCNE2O96020 404 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 DSG3P32926 999 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 CAP2P40123 477 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 CETN2P41208 172 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 ACOT2P49753 483 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 PKN2Q16513 984 aaKnown RBP7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 CCNG2Q16589 344 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 SLC39A4Q6P5W5 647 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 MAP4K3Q8IVH8 894 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 SYTL5Q8TDW5 730 aaPredicted RBP7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 C7orf43Q8WVR3 580 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 L3MBTL3Q96JM7 780 aaPredicted RBP7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 MYLK2Q9H1R3 596 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 TRABDQ9H4I3 376 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 HAO1Q9UJM8 370 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 MYPNQ86TC9 1320 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 ICAM1P05362 532 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 FDX1P10109 184 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 CA4P22748 312 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 RPS6P62753 249 aaKnown RBP7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 MKRN3Q13064 507 aaKnown RBP7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 GPS1Q13098 491 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 CRYMQ14894 314 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 FASTKD3Q14CZ7 662 aaKnown RBP7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 TMEM63BQ5T3F8 832 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 PCNX4Q63HM2 1172 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 MIS18BP1Q6P0N0 1132 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 ANO5Q75V66 913 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 C4orf19Q8IY42 314 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 GPD1LQ8N335 351 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 BBOF1Q8ND07 529 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 TMC2Q8TDI7 906 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 ZNF516Q92618 1163 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 FAM81BQ96LP2 452 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 RMDN3Q96TC7 470 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 FAM167BQ9BTA0 163 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 GABBR1Q9UBS5 961 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 ZNF70Q9UC06 446 aaPredicted RBP7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 DNPEPQ9ULA0 475 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 PHTF1Q9UMS5 762 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 UBIAD1Q9Y5Z9 338 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 WDR64B1ANS9 1081 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 PMM2O15305 246 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 HLA-DRAP01903 254 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 POTEJP0CG39 1038 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 HARSP12081 509 aaKnown RBP7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 PIK3CAP42336 1068 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 HSD17B4P51659 736 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 ARSEP51690 589 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 SNRPFP62306 86 aaKnown RBP7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 NOP14P78316 857 aaKnown RBP7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 CENPCQ03188 943 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 HHATQ5VTY9 493 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 MICAL1Q8TDZ2 1067 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 CLEC4DQ8WXI8 215 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 MFSD14AQ96MC6 490 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 CFAP57Q96MR6 1250 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 LRRC37BQ96QE4 947 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 ST6GALNAC4Q9H4F1 302 aa7.98□□□□□ -1.13
SMARCC1-202ENST00000425518 SLC24A3Q9HC58 644 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms