RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 EFEMP2O95967 443 aa23.68■■□□□ 1.38
HMGA2-205ENST00000425208 ITGB3P05106 788 aa23.68■■□□□ 1.38
HMGA2-205ENST00000425208 IRS1P35568 1242 aa23.68■■□□□ 1.38
HMGA2-205ENST00000425208 BFSP1Q12934 665 aa23.68■■□□□ 1.38
HMGA2-205ENST00000425208 STX1AQ16623 288 aa23.68■■□□□ 1.38
HMGA2-205ENST00000425208 PLPP4Q5VZY2 271 aa23.68■■□□□ 1.38
HMGA2-205ENST00000425208 PLEKHO2Q8TD55 490 aa23.68■■□□□ 1.38
HMGA2-205ENST00000425208 TMC2Q8TDI7 906 aa23.68■■□□□ 1.38
HMGA2-205ENST00000425208 FAM84AQ96KN4 292 aa23.68■■□□□ 1.38
HMGA2-205ENST00000425208 GZF1Q9H116 711 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-205ENST00000425208 ANO10Q9NW15 660 aa23.68■■□□□ 1.38
HMGA2-205ENST00000425208 R3HCC1Q9Y3T6 440 aaKnown RBP23.68■■□□□ 1.38
HMGA2-205ENST00000425208 PIRO00625 290 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 FSCN2O14926 492 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 URODP06132 367 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 CTSAP10619 480 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 ERCC5P28715 1186 aaPredicted RBP23.67■■□□□ 1.38
HMGA2-205ENST00000425208 VAMP7P51809 220 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 AP3M2P53677 418 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 CLDN10P78369 228 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 ENPEPQ07075 957 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 SMC1AQ14683 1233 aaKnown RBP23.67■■□□□ 1.38
HMGA2-205ENST00000425208 NFKBIBQ15653 356 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 USP41Q3LFD5 358 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 CT47A1Q5JQC4 288 aaPredicted RBP23.67■■□□□ 1.38
HMGA2-205ENST00000425208 KIAA1841Q6NSI8 718 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 CD300LGQ6UXG3 332 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 ZNF560Q96MR9 790 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 VWA8A3KMH1 1905 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 PPEF2O14830 753 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 FGFR1OPO95684 399 aaKnown RBP23.67■■□□□ 1.38
HMGA2-205ENST00000425208 KRT19P08727 400 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 IGFBP6P24592 240 aaPredicted RBP23.67■■□□□ 1.38
HMGA2-205ENST00000425208 POLR2BP30876 1174 aaKnown RBP23.67■■□□□ 1.38
HMGA2-205ENST00000425208 CA8P35219 290 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 BRCC3P46736 316 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 GLUD2P49448 558 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 FAM171A1Q5VUB5 890 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 FILIP1Q7Z7B0 1213 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 MICALL1Q8N3F8 863 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 PPP2R3CQ969Q6 453 aa23.67■■□□□ 1.38
HMGA2-205ENST00000425208 NSUN3Q9H649 340 aaKnown RBP23.67■■□□□ 1.38
HMGA2-205ENST00000425208 IKBKBO14920 756 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 LETM1O95202 739 aaPredicted RBP23.66■■□□□ 1.38
HMGA2-205ENST00000425208 PAX3P23760 479 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 PNPLA4P41247 253 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 TAF6P49848 677 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 DLG4P78352 724 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 RBP5P82980 135 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.66■■□□□ 1.38
HMGA2-205ENST00000425208 TAS1R1Q7RTX1 841 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 TRAPPC11Q7Z392 1133 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 TTPALQ9BTX7 342 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 MRPL17Q9NRX2 175 aaKnown RBP23.66■■□□□ 1.38
HMGA2-205ENST00000425208 CHST7Q9NS84 486 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 AGAP1Q9UPQ3 857 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 SSX2IPQ9Y2D8 614 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 PCDHGC5Q9Y5F6 944 aa23.66■■□□□ 1.38
HMGA2-205ENST00000425208 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-205ENST00000425208 I3L4J1 428 aa23.65■■□□□ 1.38
HMGA2-205ENST00000425208 AARSP49588 968 aaKnown RBP eCLIP23.65■■□□□ 1.38
HMGA2-205ENST00000425208 LILRA4P59901 499 aa23.65■■□□□ 1.38
HMGA2-205ENST00000425208 TPD52L1Q16890 204 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-205ENST00000425208 CCDC40Q4G0X9 1142 aa23.65■■□□□ 1.38
HMGA2-205ENST00000425208 CEP57Q86XR8 500 aa23.65■■□□□ 1.38
HMGA2-205ENST00000425208 LRRC52Q8N7C0 313 aa23.65■■□□□ 1.38
HMGA2-205ENST00000425208 CXorf38Q8TB03 319 aa23.65■■□□□ 1.38
HMGA2-205ENST00000425208 BORCS6Q96GS4 357 aa23.65■■□□□ 1.38
HMGA2-205ENST00000425208 SUSD3Q96L08 255 aa23.65■■□□□ 1.38
HMGA2-205ENST00000425208 B3GALT6Q96L58 329 aa23.65■■□□□ 1.38
HMGA2-205ENST00000425208 SRRTQ9BXP5 876 aaKnown RBP23.65■■□□□ 1.38
HMGA2-205ENST00000425208 METTL14Q9HCE5 456 aaKnown RBP23.65■■□□□ 1.38
HMGA2-205ENST00000425208 ARMCX3Q9UH62 379 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-205ENST00000425208 SIX4Q9UIU6 781 aa23.65■■□□□ 1.38
HMGA2-205ENST00000425208 IRAK3Q9Y616 596 aa23.65■■□□□ 1.38
HMGA2-205ENST00000425208 C2CD2LO14523 706 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 CXCL14O95715 111 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 GNA14O95837 355 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 DSG1Q02413 1049 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 TYRO3Q06418 890 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 BIRC3Q13489 604 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 PTPN14Q15678 1187 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 SV2CQ496J9 727 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 FRMD5Q7Z6J6 570 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 MRPL43Q8N983 215 aaKnown RBP23.64■■□□□ 1.37
HMGA2-205ENST00000425208 AUTS2Q8WXX7 1259 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 ZNF516Q92618 1163 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 MED15Q96RN5 788 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 STXBP5LQ9Y2K9 1186 aa23.64■■□□□ 1.37
HMGA2-205ENST00000425208 HIDE1A8MVS5 230 aa23.63■■□□□ 1.37
HMGA2-205ENST00000425208 SYN3O14994 580 aa23.63■■□□□ 1.37
HMGA2-205ENST00000425208 PHACTR2O75167 634 aa23.63■■□□□ 1.37
HMGA2-205ENST00000425208 TRIM49P0CI25 452 aa23.63■■□□□ 1.37
HMGA2-205ENST00000425208 TRIM49CP0CI26 452 aa23.63■■□□□ 1.37
HMGA2-205ENST00000425208 FGFR3P22607 806 aa23.63■■□□□ 1.37
HMGA2-205ENST00000425208 DCAF17Q5H9S7 520 aaPredicted RBP23.63■■□□□ 1.37
HMGA2-205ENST00000425208 RTP2Q5QGT7 225 aa23.63■■□□□ 1.37
HMGA2-205ENST00000425208 TCERG1LQ5VWI1 586 aa23.63■■□□□ 1.37
HMGA2-205ENST00000425208 DSTYKQ6XUX3 929 aa23.63■■□□□ 1.37
HMGA2-205ENST00000425208 ARHGEF37A1IGU5 675 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms