RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.17■□□□□ 0.02
ACTN4-203ENST00000424234 MACROD2A1Z1Q3 448 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 EXTL3O43909 919 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 EXOC3O60645 756 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 AFPP02771 609 aaKnown RBP15.17■□□□□ 0.02
ACTN4-203ENST00000424234 PRLRP16471 622 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 MCM3P25205 808 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 GRM5P41594 1212 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 ACOT2P49753 483 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 POLR2FP61218 127 aaKnown RBP15.17■□□□□ 0.02
ACTN4-203ENST00000424234 SNRNP35Q16560 246 aaKnown RBP15.17■□□□□ 0.02
ACTN4-203ENST00000424234 WDR93Q6P2C0 686 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 FAM43BQ6ZT52 329 aaPredicted RBP15.17■□□□□ 0.02
ACTN4-203ENST00000424234 RPUSD2Q8IZ73 545 aaKnown RBP15.17■□□□□ 0.02
ACTN4-203ENST00000424234 RNF10Q8N5U6 811 aaKnown RBP15.17■□□□□ 0.02
ACTN4-203ENST00000424234 FAM213AQ9BRX8 229 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 FUT8Q9BYC5 575 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 GANQ9H2C0 597 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 NLRC4Q9NPP4 1024 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 C1orf112Q9NSG2 853 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 AIPL1Q9NZN9 384 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 CPSF3Q9UKF6 684 aaKnown RBP15.17■□□□□ 0.02
ACTN4-203ENST00000424234 DUSP10Q9Y6W6 482 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 TSC2P49815 1807 aa15.17■□□□□ 0.02
ACTN4-203ENST00000424234 A0A0U1RQF3 1178 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 MEIS3P2A8K0S8 358 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 MEFVO15553 781 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-203ENST00000424234 LDHAP00338 332 aaKnown RBP15.16■□□□□ 0.02
ACTN4-203ENST00000424234 RHOXF2BP0C7M4 288 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 STAG3L1P0CL83 205 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 CXCL8P10145 99 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 EPB41P11171 864 aaKnown RBP15.16■□□□□ 0.02
ACTN4-203ENST00000424234 EPHB4P54760 987 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 OSTNP61366 133 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 SLC24A5Q71RS6 500 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 C16orf59Q7L2K0 433 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 ZNF598Q86UK7 904 aaKnown RBP15.16■□□□□ 0.02
ACTN4-203ENST00000424234 BRSK2Q8IWQ3 736 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 PNKPQ96T60 521 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 RHOXF2Q9BQY4 288 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 MKNK1Q9BUB5 465 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 UBXN6Q9BZV1 441 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 SNTG2Q9NY99 539 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 FRMD4BQ9Y2L6 1034 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 NR2E3Q9Y5X4 410 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 VWA8A3KMH1 1905 aa15.16■□□□□ 0.02
ACTN4-203ENST00000424234 ENPP3O14638 875 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 MAPK13O15264 365 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 ZNF623O75123 536 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 SASH3O75995 380 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 RECQL4O94761 1208 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 WNT7BP56706 349 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 CYP24A1Q07973 514 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 ENOX2Q16206 610 aaKnown RBP15.15■□□□□ 0.02
ACTN4-203ENST00000424234 ASIC2Q16515 512 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 PSRC1Q6PGN9 363 aaPredicted RBP15.15■□□□□ 0.02
ACTN4-203ENST00000424234 MRPL10Q7Z7H8 261 aaKnown RBP15.15■□□□□ 0.02
ACTN4-203ENST00000424234 ECHDC2Q86YB7 292 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 FAM186BQ8IYM0 893 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 NOA1Q8NC60 698 aaKnown RBP15.15■□□□□ 0.02
ACTN4-203ENST00000424234 APOL6Q9BWW8 343 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 KIAA1586Q9HCI6 787 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 SNX12Q9UMY4 172 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 ATG2AQ2TAZ0 1938 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 ABHD14A-ACY1A0A1B0GW23 586 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 TARSL2A2RTX5 802 aaKnown RBP15.15■□□□□ 0.02
ACTN4-203ENST00000424234 MAP2K7O14733 419 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 BAIAP3O94812 1187 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 CLTAP09496 248 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 TCP1P17987 556 aaKnown RBP15.15■□□□□ 0.02
ACTN4-203ENST00000424234 IBSPP21815 317 aaPredicted RBP15.15■□□□□ 0.02
ACTN4-203ENST00000424234 AKAP5P24588 427 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 RGS19P49795 217 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 IKBKEQ14164 716 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 KYAT1Q16773 422 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 TMEM240Q5SV17 173 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 BEND6Q5SZJ8 279 aaPredicted RBP15.15■□□□□ 0.02
ACTN4-203ENST00000424234 HDXQ7Z353 690 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 ZNF572Q7Z3I7 529 aaPredicted RBP15.15■□□□□ 0.02
ACTN4-203ENST00000424234 RDH13Q8NBN7 331 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 LPPQ93052 612 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 BORCS6Q96GS4 357 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 SNX27Q96L92 541 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 MMS19Q96T76 1030 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 LBHD1Q9BQE6 289 aaPredicted RBP15.15■□□□□ 0.02
ACTN4-203ENST00000424234 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.15■□□□□ 0.022e-10■■■■□ 25.5
ACTN4-203ENST00000424234 CRACR2AQ9BSW2 395 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 RBAKQ9NYW8 714 aaPredicted RBP15.15■□□□□ 0.02
ACTN4-203ENST00000424234 CAPN6Q9Y6Q1 641 aa15.15■□□□□ 0.02
ACTN4-203ENST00000424234 PLXNA4Q9HCM2 1894 aa15.14■□□□□ 0.01
ACTN4-203ENST00000424234 GTPBP10A4D1E9 387 aaKnown RBP15.14■□□□□ 0.01
ACTN4-203ENST00000424234 ZNF233A6NK53 670 aa15.14■□□□□ 0.01
ACTN4-203ENST00000424234 SRGAP2O75044 1071 aa15.14■□□□□ 0.01
ACTN4-203ENST00000424234 MOCS3O95396 460 aa15.14■□□□□ 0.01
ACTN4-203ENST00000424234 SKIP12755 728 aa15.14■□□□□ 0.01
ACTN4-203ENST00000424234 ACTN1P12814 892 aa15.14■□□□□ 0.01
ACTN4-203ENST00000424234 PSMC2P35998 433 aaKnown RBP15.14■□□□□ 0.01
ACTN4-203ENST00000424234 MAGEA10P43363 369 aaPredicted RBP15.14■□□□□ 0.01
ACTN4-203ENST00000424234 WDR5P61964 334 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms