RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 ARL13BQ3SXY8 428 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 C3orf62Q6ZUJ4 267 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 SPDYE1Q8NFV5 336 aaPredicted RBP11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 PGBD4Q96DM1 585 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 ATG4CQ96DT6 458 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 MTMR8Q96EF0 704 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 PRMT6Q96LA8 375 aaPredicted RBP11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 POLR3CQ9BUI4 534 aaPredicted RBP11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 KIAA1586Q9HCI6 787 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 ZFATQ9P243 1243 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 IP6K2Q9UHH9 426 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 PDS5AQ29RF7 1337 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 UBA6A0AVT1 1052 aaPredicted RBP11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 GRID2IPA4D2P6 1211 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 MSH4O15457 936 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 AKAP3O75969 853 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 HLA-DRAP01903 254 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 KCNJ6P48051 423 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 COPS2P61201 443 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 MDM2Q00987 491 aaPredicted RBP11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 TAF1BQ53T94 588 aaPredicted RBP11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 RAPGEF5Q92565 580 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 DHX38Q92620 1227 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 SEC16BQ96JE7 1060 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 ERP44Q9BS26 406 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 ITGB4P16144 1822 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 LOC102724159A0A0B4J2E5 919 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 GLI1P08151 1106 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 ARP10275 920 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 HSD17B3P37058 310 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 PHKA2P46019 1235 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 CASP7P55210 303 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 ROR1Q01973 937 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 PWP2Q15269 919 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 SURF1Q15526 300 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 PKN1Q16512 942 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 TTC13Q8NBP0 860 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 GLIS3Q8NEA6 775 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 GJD4Q96KN9 370 aaPredicted RBP11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 TAAR1Q96RJ0 339 aa11.19□□□□□ -0.62
SEMA4D-208ENST00000422704 ITIH6Q6UXX5 1313 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 SFNP31947 248 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 ITGA8P53708 1063 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 SZRD1Q7Z422 152 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 CASKIN2Q8WXE0 1202 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 KCNB2Q92953 911 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 XPO6Q96QU8 1125 aaKnown RBP11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 TSC22D3Q99576 134 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 PARVAQ9NVD7 372 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 WARS2Q9UGM6 360 aaKnown RBP11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 LRFN2Q9ULH4 789 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 TJP1Q07157 1748 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 CDH16O75309 829 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 COG2Q14746 738 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 MORF4L2Q15014 288 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 GLRA4Q5JXX5 417 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 TRIM65Q6PJ69 517 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 EPS8L3Q8TE67 593 aaKnown RBP11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 ACAP3Q96P50 834 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 ERGIC2Q96RQ1 377 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 ELP3Q9H9T3 547 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 HACD3Q9P035 362 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 STOML1Q9UBI4 398 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 SLC12A6Q9UHW9 1150 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 CNOT7Q9UIV1 285 aaKnown RBP11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 PFDN6O15212 129 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 SEC24DO94855 1032 aaPredicted RBP11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 PRKCBP05771 671 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 H2AFXP16104 143 aaPredicted RBP11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 HSPA9P38646 679 aaKnown RBP11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 ESRRGP62508 458 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 SLC10A5Q5PT55 438 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 MICALL2Q8IY33 904 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 SPATA18Q8TC71 538 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 SGF29Q96ES7 293 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 TSPYL2Q9H2G4 693 aaPredicted RBP11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 AGPAT3Q9NRZ7 376 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 POLLQ9UGP5 575 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 AFF4Q9UHB7 1163 aaKnown RBP11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 ABT1Q9ULW3 272 aaKnown RBP11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 SPATA31A1Q5TZJ5 1347 aa11.18□□□□□ -0.62
SEMA4D-208ENST00000422704 SGPL1O95470 568 aa11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 TBXAS1P24557 533 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 BRD2P25440 801 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 GTF2H1P32780 548 aa11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 DHX34Q14147 1143 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 SEC23AQ15436 765 aa11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 ZSWIM2Q8NEG5 633 aa11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 ZKSCAN4Q969J2 545 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 EFHD1Q9BUP0 239 aa11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 CCDC90BQ9GZT6 254 aa11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 TRPV6Q9H1D0 765 aa11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 PCMTD2Q9NV79 361 aa11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 SUCLA2Q9P2R7 463 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 HERC5Q9UII4 1024 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 STRIP2Q9ULQ0 834 aa11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 DIS3Q9Y2L1 958 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 DYNC1LI2O43237 492 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 HMBSP08397 361 aa11.17□□□□□ -0.62
SEMA4D-208ENST00000422704 PGM1P36871 562 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms