RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CLSTN1O94985 981 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 KIF4AO95239 1232 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 HLA-DRAP01903 254 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 ITGB1P05556 798 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 CA3P07451 260 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 LRPAP1P30533 357 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 SLC11A1P49279 550 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 BCAR1P56945 870 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 PLCB2Q00722 1185 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 NCOA4Q13772 614 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 PTPN21Q16825 1174 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 SPRED2Q7Z698 418 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 NAP1L5Q96NT1 182 aaPredicted RBP16.94■□□□□ 0.3
DDX55-203ENST00000421670 CRACR2AQ9BSW2 395 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 PBX4Q9BYU1 374 aa16.94■□□□□ 0.3
DDX55-203ENST00000421670 YBX2Q9Y2T7 364 aaKnown RBP16.94■□□□□ 0.3
DDX55-203ENST00000421670 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.93■□□□□ 0.3
DDX55-203ENST00000421670 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.93■□□□□ 0.3
DDX55-203ENST00000421670 NRP1O14786 923 aa16.93■□□□□ 0.3
DDX55-203ENST00000421670 N4BP1O75113 896 aaKnown RBP16.93■□□□□ 0.3
DDX55-203ENST00000421670 LINC00271P0C7V0 271 aa16.93■□□□□ 0.3
DDX55-203ENST00000421670 COL4A4P53420 1690 aaPredicted RBP16.93■□□□□ 0.3
DDX55-203ENST00000421670 MYL6P60660 151 aa16.93■□□□□ 0.3
DDX55-203ENST00000421670 TRPC3Q13507 836 aa16.93■□□□□ 0.3
DDX55-203ENST00000421670 EPC2Q52LR7 807 aa16.93■□□□□ 0.3
DDX55-203ENST00000421670 TMEM173Q86WV6 379 aaPredicted RBP16.93■□□□□ 0.3
DDX55-203ENST00000421670 FBXL13Q8NEE6 735 aa16.93■□□□□ 0.3
DDX55-203ENST00000421670 SEMA4DQ92854 862 aa16.93■□□□□ 0.3
DDX55-203ENST00000421670 UROC1Q96N76 676 aa16.93■□□□□ 0.3
DDX55-203ENST00000421670 PI4K2AQ9BTU6 479 aa16.93■□□□□ 0.3
DDX55-203ENST00000421670 IFNKQ9P0W0 207 aa16.93■□□□□ 0.3
DDX55-203ENST00000421670 GCNT4Q9P109 453 aa16.93■□□□□ 0.3
DDX55-203ENST00000421670 PCDHA11Q9Y5I1 949 aa16.93■□□□□ 0.3
DDX55-203ENST00000421670 A0A1B0GTH6 734 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 LINC01553A4QN01 128 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 PIRO00625 290 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 TEX33O43247 280 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 AP5Z1O43299 807 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 GALTP07902 379 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 RPL9P32969 192 aaKnown RBP16.92■□□□□ 0.3
DDX55-203ENST00000421670 RBP5P82980 135 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 KCNT2Q6UVM3 1135 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 COLGALT1Q8NBJ5 622 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 TMEM175Q9BSA9 504 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 MARCH5Q9NX47 278 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 RAB20Q9NX57 234 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 COLQQ9Y215 455 aaPredicted RBP16.92■□□□□ 0.3
DDX55-203ENST00000421670 R3HCC1Q9Y3T6 440 aaKnown RBP16.92■□□□□ 0.3
DDX55-203ENST00000421670 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.92■□□□□ 0.3
DDX55-203ENST00000421670 ATG2AQ2TAZ0 1938 aa16.92■□□□□ 0.3
DDX55-203ENST00000421670 B3GAT3O94766 335 aa16.91■□□□□ 0.3
DDX55-203ENST00000421670 LAG3P18627 525 aa16.91■□□□□ 0.3
DDX55-203ENST00000421670 ALDH7A1P49419 539 aaKnown RBP16.91■□□□□ 0.3
DDX55-203ENST00000421670 UBASH3AP57075 661 aa16.91■□□□□ 0.3
DDX55-203ENST00000421670 UBXN1Q04323 297 aa16.91■□□□□ 0.3
DDX55-203ENST00000421670 FILIP1LQ4L180 1135 aa16.91■□□□□ 0.3
DDX55-203ENST00000421670 SPOPLQ6IQ16 392 aa16.91■□□□□ 0.3
DDX55-203ENST00000421670 BCL7CQ8WUZ0 217 aaPredicted RBP16.91■□□□□ 0.3
DDX55-203ENST00000421670 CLP1Q92989 425 aaKnown RBP16.91■□□□□ 0.3
DDX55-203ENST00000421670 DDX27Q96GQ7 796 aaKnown RBP16.91■□□□□ 0.3
DDX55-203ENST00000421670 HPDLQ96IR7 371 aa16.91■□□□□ 0.3
DDX55-203ENST00000421670 ZNF558Q96NG5 402 aa16.91■□□□□ 0.3
DDX55-203ENST00000421670 XYLT2Q9H1B5 865 aa16.91■□□□□ 0.3
DDX55-203ENST00000421670 RTN4Q9NQC3 1192 aaKnown RBP16.91■□□□□ 0.3
DDX55-203ENST00000421670 MTUS1Q9ULD2 1270 aa16.91■□□□□ 0.3
DDX55-203ENST00000421670 FAN1Q9Y2M0 1017 aa16.91■□□□□ 0.3
DDX55-203ENST00000421670 COQ4Q9Y3A0 265 aa16.91■□□□□ 0.3
DDX55-203ENST00000421670 I3L4J1 428 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 SPTLC1O15269 473 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 PMM2O15305 246 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 P4HA2O15460 535 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 ALDH2P05091 517 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 APBA1Q02410 837 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 CETN1Q12798 172 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 EXOC3L4Q17RC7 722 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 ZNF699Q32M78 642 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 FKBP15Q5T1M5 1219 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 PRPF38BQ5VTL8 546 aaKnown RBP16.9■□□□□ 0.3
DDX55-203ENST00000421670 CD300LGQ6UXG3 332 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 LRRC52Q8N7C0 313 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 ZNF560Q96MR9 790 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 C17orf80Q9BSJ5 609 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 XPO4Q9C0E2 1151 aaKnown RBP16.9■□□□□ 0.3
DDX55-203ENST00000421670 INTS2Q9H0H0 1204 aaKnown RBP16.9■□□□□ 0.3
DDX55-203ENST00000421670 REV3LO60673 3130 aa16.9■□□□□ 0.3
DDX55-203ENST00000421670 ASS1P00966 412 aaKnown RBP16.89■□□□□ 0.3
DDX55-203ENST00000421670 SLC9A1P19634 815 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 CTNNB1P35222 781 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 BRCC3P46736 316 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 TAF6P49848 677 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 KLK7P49862 253 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 LILRA4P59901 499 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 NOP14P78316 857 aaKnown RBP16.89■□□□□ 0.3
DDX55-203ENST00000421670 LRMPQ12912 555 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 DCLRE1AQ6PJP8 1040 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 GBP6Q6ZN66 633 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 LMO3Q8TAP4 145 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 IMPG2Q9BZV3 1241 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 NKX2-4Q9H2Z4 354 aa16.89■□□□□ 0.3
DDX55-203ENST00000421670 APOBEC3GQ9HC16 384 aaKnown RBP16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms