RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 RAB34Q9BZG1 259 aa18.45■□□□□ 0.54
UPF3AP3-201ENST00000420996 EPC1Q9H2F5 836 aa18.45■□□□□ 0.54
UPF3AP3-201ENST00000420996 C17orf75Q9HAS0 396 aa18.45■□□□□ 0.54
UPF3AP3-201ENST00000420996 E9PMD0 336 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 SDHBP21912 280 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 CCR2P41597 374 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 HMGN5P82970 282 aaKnown RBP18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 MTAPQ13126 283 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 GRM2Q14416 872 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 NBR1Q14596 966 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 CYP4A22Q5TCH4 519 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 IQCEQ6IPM2 695 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 TSSK4Q6SA08 328 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 MAMSTRQ6ZN01 415 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 C1orf186Q6ZWK4 172 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 ZNF687Q8N1G0 1237 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 IRF7Q92985 503 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 ZNF512Q96ME7 567 aaPredicted RBP18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 NTPCRQ9BSD7 190 aaKnown RBP18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 TRPV5Q9NQA5 729 aa18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 AFF4Q9UHB7 1163 aaKnown RBP18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 SMG5Q9UPR3 1016 aaKnown RBP18.44■□□□□ 0.54
UPF3AP3-201ENST00000420996 COL4A2P08572 1712 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 TICRRQ7Z2Z1 1910 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 MYH11P35749 1972 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 PSMC3P17980 439 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 MCM4P33991 863 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 MAPK7Q13164 816 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 PTGDRQ13258 359 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 KRT79Q5XKE5 535 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 ZNF280DQ6N043 979 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 RINT1Q6NUQ1 792 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 MAP4K3Q8IVH8 894 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 LEMD2Q8NC56 503 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 APPL2Q8NEU8 664 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 DDX12PQ92771 950 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 SMARCD2Q92925 531 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 TBC1D32Q96NH3 1257 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 IER2Q9BTL4 223 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 RUSC1Q9BVN2 902 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 TIPINQ9BVW5 301 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 CHRDQ9H2X0 955 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 ZNF334Q9HCZ1 680 aaPredicted RBP18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 NDRG2Q9UN36 371 aaKnown RBP18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 GPR179Q6PRD1 2367 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 CEP250Q9BV73 2442 aa18.43■□□□□ 0.54
UPF3AP3-201ENST00000420996 NRG2O14511 850 aaPredicted RBP18.42■□□□□ 0.54
UPF3AP3-201ENST00000420996 SLC16A4O15374 487 aa18.42■□□□□ 0.54
UPF3AP3-201ENST00000420996 MEFVO15553 781 aaPredicted RBP18.42■□□□□ 0.54
UPF3AP3-201ENST00000420996 TOB1P50616 345 aaPredicted RBP18.42■□□□□ 0.54
UPF3AP3-201ENST00000420996 EPHA5P54756 1037 aa18.42■□□□□ 0.54
UPF3AP3-201ENST00000420996 SLC10A6Q3KNW5 377 aa18.42■□□□□ 0.54
UPF3AP3-201ENST00000420996 VITQ6UXI7 678 aa18.42■□□□□ 0.54
UPF3AP3-201ENST00000420996 HS6ST3Q8IZP7 471 aa18.42■□□□□ 0.54
UPF3AP3-201ENST00000420996 ZBTB45Q96K62 511 aaPredicted RBP18.42■□□□□ 0.54
UPF3AP3-201ENST00000420996 ZSWIM3Q96MP5 696 aa18.42■□□□□ 0.54
UPF3AP3-201ENST00000420996 CEP72Q9P209 647 aa18.42■□□□□ 0.54
UPF3AP3-201ENST00000420996 PCDHB8Q9UN66 801 aa18.42■□□□□ 0.54
UPF3AP3-201ENST00000420996 SFI1A8K8P3 1242 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 PP2D1A8MPX8 630 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 MOSPD3O75425 235 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 TOM1L1O75674 476 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 HARSP12081 509 aaKnown RBP18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 U2AF2P26368 475 aaKnown RBP eCLIP18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 MARCKSP29966 332 aaPredicted RBP18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 GDI1P31150 447 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 NRLP54845 237 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 TWF1Q12792 350 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 STRN3Q13033 797 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 NOLC1Q14978 699 aaKnown RBP eCLIP18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 FAM184AQ8NB25 1140 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 DEPDC1BQ8WUY9 529 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 FAM3CQ92520 227 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 TRPV4Q9HBA0 871 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 KCNG1Q9UIX4 513 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 PCDHB6Q9Y5E3 794 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 F5P12259 2224 aa18.41■□□□□ 0.54
UPF3AP3-201ENST00000420996 PRR5-ARHGAP8B1AHC4 643 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 LAD1O00515 517 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 MYL4P12829 197 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 TDGF1P13385 188 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 CPB1P15086 417 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 GUCY2CP25092 1073 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 PRPHP41219 470 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 VIPR2P41587 438 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 ARHGAP8P85298 464 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 LMNB2Q03252 620 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 PPP2R5DQ14738 602 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 IL17AQ16552 155 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 RNF19BQ6ZMZ0 732 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 KCNK18Q7Z418 384 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 MFSD6LQ8IWD5 586 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 ZSCAN18Q8TBC5 510 aaPredicted RBP18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 SPIRE2Q8WWL2 714 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 ZSCAN31Q96LW9 406 aaPredicted RBP18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 MMTAG2Q9BU76 263 aaKnown RBP18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 GPR88Q9GZN0 384 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 LMAN1LQ9HAT1 526 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 PLEKHA5Q9HAU0 1116 aa18.4■□□□□ 0.54
UPF3AP3-201ENST00000420996 ASAH2Q9NR71 780 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms