RNA–Protein interactions for RNA: ENST00000420670.5

SEMA4D-205, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-205ENST00000420670 C1orf220Q5T0J3 134 aa17.09■□□□□ 0.33
SEMA4D-205ENST00000420670 PLPP4Q5VZY2 271 aa17.09■□□□□ 0.33
SEMA4D-205ENST00000420670 C11orf57Q6ZUT1 292 aaPredicted RBP17.09■□□□□ 0.33
SEMA4D-205ENST00000420670 CSGALNACT2Q8N6G5 542 aa17.09■□□□□ 0.33
SEMA4D-205ENST00000420670 TMC2Q8TDI7 906 aa17.09■□□□□ 0.33
SEMA4D-205ENST00000420670 AUTS2Q8WXX7 1259 aa17.09■□□□□ 0.33
SEMA4D-205ENST00000420670 BORCS6Q96GS4 357 aa17.09■□□□□ 0.33
SEMA4D-205ENST00000420670 B3GALT6Q96L58 329 aa17.09■□□□□ 0.33
SEMA4D-205ENST00000420670 ZBP1Q9H171 429 aa17.09■□□□□ 0.33
SEMA4D-205ENST00000420670 DACH1Q9UI36 760 aa17.09■□□□□ 0.33
SEMA4D-205ENST00000420670 SF3B1O75533 1304 aaKnown RBP eCLIP17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 PIRO00625 290 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 FSCN2O14926 492 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 SLC16A3O15427 465 aaKnown RBP17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 TNNC2P02585 160 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 SOD2P04179 222 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 KRT13P13646 458 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 FOSL2P15408 326 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 POLR2BP30876 1174 aaKnown RBP17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 TYRO3Q06418 890 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 BFSP1Q12934 665 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 DUOXA2Q1HG44 320 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 FAM171A1Q5VUB5 890 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 INTS8Q75QN2 995 aaKnown RBP17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 TRAPPC11Q7Z392 1133 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 TMC7Q7Z402 723 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 FILIP1Q7Z7B0 1213 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 CXorf38Q8TB03 319 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 CEP63Q96MT8 703 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 TCF25Q9BQ70 676 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 SRRTQ9BXP5 876 aaKnown RBP17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 ENTPD7Q9NQZ7 604 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 ANO10Q9NW15 660 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 LMCD1Q9NZU5 365 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 SIX4Q9UIU6 781 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 AGAP1Q9UPQ3 857 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 NUB1Q9Y5A7 615 aa17.08■□□□□ 0.32
SEMA4D-205ENST00000420670 SYCE3A1L190 88 aa17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 KRT19P08727 400 aa17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 CTSAP10619 480 aa17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 POU3F3P20264 500 aaPredicted RBP17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 ERCC5P28715 1186 aaPredicted RBP17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 CA8P35219 290 aa17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 CLDN10P78369 228 aa17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 CCDC40Q4G0X9 1142 aa17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 TIGD5Q53EQ6 642 aa17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 ADGRD2Q7Z7M1 963 aa17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 MICALL1Q8N3F8 863 aa17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 MICAL1Q8TDZ2 1067 aa17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 ITGA11Q9UKX5 1188 aa17.07■□□□□ 0.32
SEMA4D-205ENST00000420670 C2CD2LO14523 706 aa17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 SPTLC1O15269 473 aa17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 CXCL14O95715 111 aa17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 TKTP29401 623 aaKnown RBP17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 GLUD2P49448 558 aa17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 LILRA4P59901 499 aa17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 PPP3CAQ08209 521 aa17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 ELAVL2Q12926 359 aaKnown RBP17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 USP41Q3LFD5 358 aa17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 RTP2Q5QGT7 225 aa17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 TDRD10Q5VZ19 366 aaKnown RBP17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 CEP57Q86XR8 500 aa17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 SUSD3Q96L08 255 aa17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 DNAJC25Q9H1X3 360 aa17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 MMRN2Q9H8L6 949 aa17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 ARMCX3Q9UH62 379 aaPredicted RBP17.06■□□□□ 0.32
SEMA4D-205ENST00000420670 HIDE1A8MVS5 230 aa17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 CST3P01034 146 aaPredicted RBP17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 C4BPAP04003 597 aaKnown RBP17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 URODP06132 367 aa17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 FGFR3P22607 806 aa17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 GCLMP48507 274 aa17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 AARSP49588 968 aaKnown RBP eCLIP17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 TAF6P49848 677 aa17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 MCCD1P59942 119 aaPredicted RBP17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 RBP5P82980 135 aa17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 DSG1Q02413 1049 aa17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 BIRC3Q13489 604 aa17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 SMC1AQ14683 1233 aaKnown RBP17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 PTPN14Q15678 1187 aa17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 TPD52L1Q16890 204 aaPredicted RBP17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 DCAF17Q5H9S7 520 aaPredicted RBP17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 PRSS55Q6UWB4 352 aaPredicted RBP17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 RIN2Q8WYP3 895 aaPredicted RBP17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 ZNF560Q96MR9 790 aa17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 FUCA2Q9BTY2 467 aa17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 NGRNQ9NPE2 291 aaKnown RBP17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 CHST7Q9NS84 486 aa17.05■□□□□ 0.32
SEMA4D-205ENST00000420670 BRWD1Q9NSI6 2320 aa17.04■□□□□ 0.32
SEMA4D-205ENST00000420670 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.04■□□□□ 0.32
SEMA4D-205ENST00000420670 C2orf71A6NGG8 1288 aa17.04■□□□□ 0.32
SEMA4D-205ENST00000420670 IKBKBO14920 756 aa17.04■□□□□ 0.32
SEMA4D-205ENST00000420670 TRAPPC3O43617 180 aa17.04■□□□□ 0.32
SEMA4D-205ENST00000420670 PHACTR2O75167 634 aa17.04■□□□□ 0.32
SEMA4D-205ENST00000420670 LETM1O95202 739 aaPredicted RBP17.04■□□□□ 0.32
SEMA4D-205ENST00000420670 VNN1O95497 513 aa17.04■□□□□ 0.32
SEMA4D-205ENST00000420670 FGFR1OPO95684 399 aaKnown RBP17.04■□□□□ 0.32
SEMA4D-205ENST00000420670 AP3M2P53677 418 aa17.04■□□□□ 0.32
SEMA4D-205ENST00000420670 ENPEPQ07075 957 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms