RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TGFB1I1O43294 461 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 MTHFRP42898 656 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 VARS2Q5ST30 1063 aaKnown RBP22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 SLC8B1Q6J4K2 584 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 CES5AQ6NT32 575 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 SCFD1Q8WVM8 642 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 POMGNT1Q8WZA1 660 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 SAAL1Q96ER3 474 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 RPGRIP1Q96KN7 1286 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 PLEKHA4Q9H4M7 779 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 ASB7Q9H672 318 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 EXOC7Q9UPT5 735 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 SCN1AP35498 2009 aa22.4■■□□□ 1.18
PKNOX1-202ENST00000418336 PVALEFA0A1B0GWK0 134 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 A0A1W2PQ27 194 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 A0A1W2PQ64 194 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 A0A1W2PQD8 194 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 C2CD4DB7Z1M9 353 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 PIRO00625 290 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 TRAPPC3O43617 180 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 AFMP43652 599 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 NDUFA8P51970 172 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 POSTNQ15063 836 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 FAM26FQ5R3K3 315 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 PDXDC1Q6P996 788 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 KREMEN2Q8NCW0 462 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 TMEM206Q9H813 350 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 GDPD2Q9HCC8 539 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 MUTYHQ9UIF7 546 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 C2CD2Q9Y426 696 aa22.39■■□□□ 1.17
PKNOX1-202ENST00000418336 CCDC195A0A1B0GUA6 201 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 N4BP1O75113 896 aaKnown RBP22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 ZMYND10O75800 440 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 OR1D2P34982 312 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 BMT2Q1RMZ1 405 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 C9orf57Q5W0N0 161 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 ANKS3Q6ZW76 656 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 BRSK2Q8IWQ3 736 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 RIPOR3Q96MK2 946 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 PYM1Q9BRP8 204 aaKnown RBP22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 FAM213AQ9BRX8 229 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 SCAND2PQ9GZW5 306 aaPredicted RBP22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 ZDHHC7Q9NXF8 308 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 PCDHB8Q9UN66 801 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 CDY1Q9Y6F8 540 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 DOCK6Q96HP0 2047 aa22.38■■□□□ 1.17
PKNOX1-202ENST00000418336 NOTCH4Q99466 2003 aa22.37■■□□□ 1.17
PKNOX1-202ENST00000418336 ABLIM3O94929 683 aa22.37■■□□□ 1.17
PKNOX1-202ENST00000418336 TMEM132DQ14C87 1099 aa22.37■■□□□ 1.17
PKNOX1-202ENST00000418336 ATAT1Q5SQI0 421 aa22.37■■□□□ 1.17
PKNOX1-202ENST00000418336 BORCS6Q96GS4 357 aa22.37■■□□□ 1.17
PKNOX1-202ENST00000418336 FAM84AQ96KN4 292 aa22.37■■□□□ 1.17
PKNOX1-202ENST00000418336 ATP6V1DQ9Y5K8 247 aa22.37■■□□□ 1.17
PKNOX1-202ENST00000418336 TECTAO75443 2155 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 DOCK8Q8NF50 2099 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 WDR27A2RRH5 827 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 GOLGA8IPA6NC78 632 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 GOLGA8JA6NMD2 632 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 DCXO43602 365 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 EXTL3O43909 919 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 PRR29P0C7W0 189 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 MCM4P33991 863 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 LILRA4P59901 499 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 ROR1Q01973 937 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 CYP26C1Q6V0L0 522 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 KIAA0895Q8NCT3 520 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 FAM212AQ96EL1 285 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 PRKD2Q9BZL6 878 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 PCIF1Q9H4Z3 704 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 FBXL5Q9UKA1 691 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 NUB1Q9Y5A7 615 aa22.36■■□□□ 1.17
PKNOX1-202ENST00000418336 UBE4BO95155 1302 aa22.35■■□□□ 1.17
PKNOX1-202ENST00000418336 GPR37L1O60883 481 aa22.35■■□□□ 1.17
PKNOX1-202ENST00000418336 OAZ2O95190 189 aa22.35■■□□□ 1.17
PKNOX1-202ENST00000418336 VNN2O95498 520 aa22.35■■□□□ 1.17
PKNOX1-202ENST00000418336 SP100P23497 879 aaPredicted RBP22.35■■□□□ 1.17
PKNOX1-202ENST00000418336 BEST2Q8NFU1 509 aa22.35■■□□□ 1.17
PKNOX1-202ENST00000418336 WDR6Q9NNW5 1121 aaKnown RBP22.35■■□□□ 1.17
PKNOX1-202ENST00000418336 AGPAT3Q9NRZ7 376 aa22.35■■□□□ 1.17
PKNOX1-202ENST00000418336 USP25Q9UHP3 1055 aa22.35■■□□□ 1.17
PKNOX1-202ENST00000418336 USTQ9Y2C2 406 aa22.35■■□□□ 1.17
PKNOX1-202ENST00000418336 PTPRJQ12913 1337 aa22.34■■□□□ 1.17
PKNOX1-202ENST00000418336 XPOTO43592 962 aaKnown RBP22.34■■□□□ 1.17
PKNOX1-202ENST00000418336 IL18RAPO95256 599 aa22.34■■□□□ 1.17
PKNOX1-202ENST00000418336 POU2F2P09086 479 aa22.34■■□□□ 1.17
PKNOX1-202ENST00000418336 STK4Q13043 487 aa22.34■■□□□ 1.17
PKNOX1-202ENST00000418336 CEP57L1Q8IYX8 460 aa22.34■■□□□ 1.17
PKNOX1-202ENST00000418336 ZDHHC14Q8IZN3 488 aa22.34■■□□□ 1.17
PKNOX1-202ENST00000418336 SYCP3Q8IZU3 236 aa22.34■■□□□ 1.17
PKNOX1-202ENST00000418336 GZF1Q9H116 711 aaPredicted RBP22.34■■□□□ 1.17
PKNOX1-202ENST00000418336 SLC39A2Q9NP94 309 aa22.34■■□□□ 1.17
PKNOX1-202ENST00000418336 DPP7Q9UHL4 492 aa22.34■■□□□ 1.17
PKNOX1-202ENST00000418336 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 LDHAP00338 332 aaKnown RBP22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 C8AP07357 584 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 HOXA9P31269 272 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 SYKP43405 635 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 NUCB2P80303 420 aa22.33■■□□□ 1.17
PKNOX1-202ENST00000418336 KMT5BQ4FZB7 885 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms