RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PNMA8AQ86V59 439 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 EXOC3L1Q86VI1 746 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 CCDC60Q8IWA6 550 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 PARP9Q8IXQ6 854 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 CCDC63Q8NA47 563 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ATXN2LQ8WWM7 1075 aaKnown RBP12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 SLCO2A1Q92959 643 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ZNF317Q96PQ6 595 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 PARVAQ9NVD7 372 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 CEP83Q9Y592 693 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ADGRA3Q8IWK6 1321 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 TCP11X1B4DZS4 312 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 HMGCS2P54868 508 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 BACE1P56817 501 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 NLRP11P59045 1033 aaKnown RBP12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ADCY1Q08828 1119 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 CNGA2Q16280 664 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 CYB5D1Q6P9G0 228 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 TRPM8Q7Z2W7 1104 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 RBBP8NLQ8NC74 664 aaPredicted RBP12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 GDAP1Q8TB36 358 aa12.43□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 CDH16O75309 829 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 GHRP10912 638 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 CHKAP35790 457 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 MAP3K10Q02779 954 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ZKSCAN8Q15776 578 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 CCNG2Q16589 344 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 LLGL2Q6P1M3 1020 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 SRRM1Q8IYB3 904 aaKnown RBP12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ZNF280CQ8ND82 737 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 SENP7Q9BQF6 1050 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 VPS33BQ9H267 617 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ACAD9Q9H845 621 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 GJA3Q9Y6H8 435 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 MROH7Q68CQ1 1323 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 GRIN3BO60391 1043 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 NOP14P78316 857 aaKnown RBP12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 DAB2IPQ5VWQ8 1189 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ABRAQ8N0Z2 381 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ANKRD35Q8N283 1001 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 CCHCR1Q8TD31 782 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 CCT6BQ92526 530 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 C9orf72Q96LT7 481 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 WRNIP1Q96S55 665 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 TEX13BQ9BXU2 312 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ZNF302Q9NR11 478 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ARHGAP28Q9P2N2 729 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 PPP1R1BQ9UD71 204 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 EZRP15311 586 aaKnown RBP12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 EN1Q05925 392 aaPredicted RBP12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 TDRD10Q5VZ19 366 aaKnown RBP12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 FUKQ8N0W3 1084 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 RBM41Q96IZ5 413 aaKnown RBP12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 PLCD4Q9BRC7 762 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 TARS2Q9BW92 718 aaKnown RBP12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 XPNPEP1Q9NQW7 623 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 FGFR1OP2Q9NVK5 253 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 IP6K2Q9UHH9 426 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 BAIAP2L1Q9UHR4 511 aa12.42□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 TJP3O95049 919 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 KRT1P04264 644 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 KCNA2P16389 499 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ENPEPQ07075 957 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 NCOA4Q13772 614 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 UBAP2Q5T6F2 1119 aaKnown RBP12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 DNAJC24Q6P3W2 148 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 VCPIP1Q96JH7 1222 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 CFAP57Q96MR6 1250 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 RBM15Q96T37 977 aaKnown RBP eCLIP12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 KLHL11Q9NVR0 708 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 USP15Q9Y4E8 981 aaPredicted RBP12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 LOXHD1Q8IVV2 1947 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 MYPNQ86TC9 1320 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 IFNB1P01574 187 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 CLTAP09496 248 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 TRPC3Q13507 836 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 STAT4Q14765 748 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 STXBP2Q15833 593 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 LACTB2Q53H82 288 aaPredicted RBP12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 PPP1R21Q6ZMI0 780 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 SEPT14Q6ZU15 432 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 EXD1Q8NHP7 514 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 TCP11Q8WWU5 503 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 DDX27Q96GQ7 796 aaKnown RBP12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 ADAM7Q9H2U9 754 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 R3HDM2Q9Y2K5 976 aaKnown RBP12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 EXOC1LA0A1B0GW35 172 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 RASA4BC9J798 803 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 PI4K2BG5E9Z4 385 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 RASA4O43374 803 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 SUPT20HL2P0C7V6 817 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 KRT15P19012 456 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 NF2P35240 595 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 TMED2Q15363 201 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 P3H1Q32P28 736 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 SUPT20HL1Q3ZLR7 823 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 GBP7Q8N8V2 638 aaPredicted RBP12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 GIMAP7Q8NHV1 300 aa12.41□□□□□ -0.42
CSPG4P3Y-201ENST00000418188 FEZF2Q8TBJ5 459 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms