RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 CDC42EP5Q6NZY7 148 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 ISLR2Q6UXK2 745 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 RFWD2Q8NHY2 731 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 SNRNP27Q8WVK2 155 aaKnown RBP15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 METTL14Q9HCE5 456 aaKnown RBP15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 CLIC5Q9NZA1 410 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 BLOC1S6Q9UL45 172 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 CCDC160A6NGH7 325 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 USP17L5A8MUK1 530 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 RSPH10B2B2RC85 870 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 ZBED4O75132 1171 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 RAD17O75943 681 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 USP1O94782 785 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 ZBTB7AO95365 584 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 RSPH10BP0C881 870 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 ESRRAP11474 423 aaPredicted RBP15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 SERPINB3P29508 390 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 PHLDB3Q6NSJ2 640 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 C15orf52Q6ZUT6 534 aaKnown RBP15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 CFAP61Q8NHU2 1237 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 STK33Q9BYT3 514 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 SUDS3Q9H7L9 328 aaPredicted RBP15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 WHRNQ9P202 907 aa15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 STX18Q9P2W9 335 aaKnown RBP15.59■□□□□ 0.09
NCKIPSD-204ENST00000416649 TROVE2P10155 538 aaKnown RBP eCLIP15.58■□□□□ 0.09
NCKIPSD-204ENST00000416649 ITIH2P19823 946 aa15.58■□□□□ 0.09
NCKIPSD-204ENST00000416649 TBC1D10BQ4KMP7 808 aaPredicted RBP15.58■□□□□ 0.09
NCKIPSD-204ENST00000416649 SLC45A4Q5BKX6 768 aa15.58■□□□□ 0.09
NCKIPSD-204ENST00000416649 ARSHQ5FYA8 562 aa15.58■□□□□ 0.09
NCKIPSD-204ENST00000416649 RINLQ6ZS11 566 aa15.58■□□□□ 0.09
NCKIPSD-204ENST00000416649 SPATA24Q86W54 205 aa15.58■□□□□ 0.09
NCKIPSD-204ENST00000416649 FLAD1Q8NFF5 587 aa15.58■□□□□ 0.09
NCKIPSD-204ENST00000416649 OLIG1Q8TAK6 271 aa15.58■□□□□ 0.09
NCKIPSD-204ENST00000416649 HAS1Q92839 578 aa15.58■□□□□ 0.09
NCKIPSD-204ENST00000416649 FNBP1Q96RU3 617 aa15.58■□□□□ 0.09
NCKIPSD-204ENST00000416649 C12orf65Q9H3J6 166 aaKnown RBP15.58■□□□□ 0.09
NCKIPSD-204ENST00000416649 ANKRD31Q8N7Z5 1873 aa15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 C2orf71A6NGG8 1288 aa15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 FOXN3O00409 490 aaPredicted RBP15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 TRAFD1O14545 582 aaPredicted RBP15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 RPL13P26373 211 aaKnown RBP15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 PGM1P36871 562 aa15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 MAP7Q14244 749 aa15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 P3H1Q32P28 736 aa15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 LVRNQ6Q4G3 990 aa15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 MIPOL1Q8TD10 442 aa15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 AZIN2Q96A70 460 aa15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 MPP4Q96JB8 637 aa15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 TMCO1Q9UM00 188 aa15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.58■□□□□ 0.08
NCKIPSD-204ENST00000416649 EDIL3O43854 480 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 PIAS1O75925 651 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 FGFR1P11362 822 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 HOXD13P35453 343 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 PSMC6P62333 389 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 DSG1Q02413 1049 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 PDK4Q16654 411 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 ZNF568Q3ZCX4 644 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 MDH1BQ5I0G3 518 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 FAM186BQ8IYM0 893 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 ST13P4Q8IZP2 240 aaPredicted RBP15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 TEKT1Q969V4 418 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 ELMO3Q96BJ8 720 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 ATF5Q9Y2D1 282 aaPredicted RBP15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 CRKP46108 304 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 LSAMPQ13449 338 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 C1QTNF12Q5T7M4 302 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 CCDC62Q6P9F0 684 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 SLF2Q8IX21 1173 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 SLC25A41Q8N5S1 370 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 ZNF75CPQ92670 426 aaPredicted RBP15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 CAMKK2Q96RR4 588 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 REEP2Q9BRK0 252 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 HEMGNQ9BXL5 484 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 ZNF277Q9NRM2 450 aaPredicted RBP15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 ARMCX1Q9P291 453 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 PCDHGA4Q9Y5G9 962 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 COMMD3-BMI1R4GMX3 469 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 OR6B1O95007 311 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 GGPS1O95749 300 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 CDK7P50613 346 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 CYP2J2P51589 502 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 GPC5P78333 572 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 TMED1Q13445 227 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 APOBEC3HQ6NTF7 200 aaKnown RBP15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 MARK2Q7KZI7 788 aaKnown RBP15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 TRABD2AQ86V40 505 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 TRIM42Q8IWZ5 723 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 SYT2Q8N9I0 419 aaPredicted RBP15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 NSL1Q96IY1 281 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 AGPAT1Q99943 283 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 LZTS2Q9BRK4 669 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 TDRD3Q9H7E2 651 aaKnown RBP15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 TLE6Q9H808 572 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 TAS2R1Q9NYW7 299 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 ZNF212Q9UDV6 495 aa15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 RPL26L1Q9UNX3 145 aaKnown RBP15.57■□□□□ 0.08
NCKIPSD-204ENST00000416649 TRAF3IP3Q9Y228 551 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms