RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 TNFSF9P41273 254 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 ARPP19P56211 112 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 SPAG1Q07617 926 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 SPECC1Q5M775 1068 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 TPGS2Q68CL5 300 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 ZNF280DQ6N043 979 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 USP49Q70CQ1 688 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 MAP4K3Q8IVH8 894 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 TCEAL8Q8IYN2 117 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 ITFG1Q8TB96 612 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 PHOX2BQ99453 314 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 MSTO1Q9BUK6 570 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 ST6GALNAC4Q9H4F1 302 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 HCFC1R1Q9NWW0 138 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 MAFFQ9ULX9 164 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 NUMBLQ9Y6R0 609 aa19.14■□□□□ 0.65
PDLIM2-208ENST00000416159 A0A0B4J269 797 aa19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 H0Y858 1186 aa19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 M0QZQ0 153 aa19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 FAM189A1O60320 539 aa19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 PTPN2P17706 415 aa19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 NMT1P30419 496 aaKnown RBP19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 TXLNAP40222 546 aa19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 ENOX2Q16206 610 aaKnown RBP19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 RRAGBQ5VZM2 374 aa19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 MTSS1LQ765P7 747 aa19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 ZSCAN16Q9H4T2 348 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 AVENQ9NQS1 362 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 SLC2A4RGQ9NR83 387 aa19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 MRPS23Q9Y3D9 190 aaKnown RBP19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 MORC2Q9Y6X9 1032 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 NOTCH4Q99466 2003 aa19.13■□□□□ 0.65
PDLIM2-208ENST00000416159 KRBA1A5PL33 1030 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 STK25O00506 426 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 RHOP08100 348 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 CEBPZQ03701 1054 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 ZBTB41Q5SVQ8 909 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 SLFN12LQ6IEE8 588 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 FAM173BQ6P4H8 233 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 PARM1Q6UWI2 310 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 SV2BQ7L1I2 683 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 GPR152Q8TDT2 470 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 FGF14Q92915 247 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 OXCT2Q9BYC2 517 aaPredicted RBP19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 CYP4F11Q9HBI6 524 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 AFF4Q9UHB7 1163 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 CPSF3Q9UKF6 684 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 CA14Q9ULX7 337 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 MTMR6Q9Y217 621 aa19.12■□□□□ 0.65
PDLIM2-208ENST00000416159 K7ELQ4 463 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 PI15O43692 258 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 OAZ2O95190 189 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 RFX1P22670 979 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 PAX3P23760 479 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 AARSP49588 968 aaKnown RBP eCLIP19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 SLC39A14Q15043 492 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 SPATA1Q5VX52 437 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 SLC39A4Q6P5W5 647 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 DYMQ7RTS9 669 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 ZNF720Q7Z2F6 126 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 NPAS3Q8IXF0 933 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 BEST2Q8NFU1 509 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 HVCN1Q96D96 273 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 FAM212AQ96EL1 285 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 CLIC6Q96NY7 704 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 RPP25Q9BUL9 199 aaKnown RBP19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 FAM86C1Q9NVL1 165 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 SEL1LQ9UBV2 794 aa19.11■□□□□ 0.65
PDLIM2-208ENST00000416159 ANKRD63C9JTQ0 380 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 STX6O43752 255 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 SEC24AO95486 1093 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 GAP43P17677 238 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 POU5F1Q01860 360 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 YWHAHQ04917 246 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 ADCY1Q08828 1119 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 ZC2HC1CQ53FD0 456 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 ADALQ6DHV7 355 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 JADE1Q6IE81 842 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 PHLDB3Q6NSJ2 640 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 DSTYKQ6XUX3 929 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 CCDC73Q6ZRK6 1079 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 USP37Q86T82 979 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 SFR1Q86XK3 245 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 CCDC105Q8IYK2 499 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 ELMOD1Q8N336 334 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 ST13P5Q8NFI4 369 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 USP28Q96RU2 1077 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 ASB7Q9H672 318 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 FOXD4L1Q9NU39 408 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 GDE1Q9NZC3 331 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 DERAQ9Y315 318 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 INSL5Q9Y5Q6 135 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 STYXL1Q9Y6J8 313 aa19.1■□□□□ 0.65
PDLIM2-208ENST00000416159 WDFY4Q6ZS81 3184 aa19.09■□□□□ 0.65
PDLIM2-208ENST00000416159 ZNF197O14709 1029 aa19.09■□□□□ 0.65
PDLIM2-208ENST00000416159 CPB1P15086 417 aa19.09■□□□□ 0.65
PDLIM2-208ENST00000416159 GUCY2FP51841 1108 aa19.09■□□□□ 0.65
PDLIM2-208ENST00000416159 GPC5P78333 572 aa19.09■□□□□ 0.65
PDLIM2-208ENST00000416159 POSTNQ15063 836 aa19.09■□□□□ 0.65
PDLIM2-208ENST00000416159 TMEM130Q8N3G9 435 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms