RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 UPF3AQ9H1J1 476 aaKnown RBP11.19□□□□□ -0.62
COL12A1-203ENST00000416123 FGFR1OP2Q9NVK5 253 aa11.19□□□□□ -0.62
COL12A1-203ENST00000416123 SFMBT1Q9UHJ3 866 aa11.19□□□□□ -0.62
COL12A1-203ENST00000416123 LCMT1Q9UIC8 334 aa11.19□□□□□ -0.62
COL12A1-203ENST00000416123 MAGEB2O15479 319 aa11.19□□□□□ -0.62
COL12A1-203ENST00000416123 CD4P01730 458 aa11.19□□□□□ -0.62
COL12A1-203ENST00000416123 UCHL3P15374 230 aa11.19□□□□□ -0.62
COL12A1-203ENST00000416123 AKT1P31749 480 aa11.19□□□□□ -0.62
COL12A1-203ENST00000416123 GTF2A2P52657 109 aa11.19□□□□□ -0.62
COL12A1-203ENST00000416123 KIZQ2M2Z5 673 aa11.19□□□□□ -0.62
COL12A1-203ENST00000416123 NT5C1AQ9BXI3 368 aa11.19□□□□□ -0.62
COL12A1-203ENST00000416123 RAB6BQ9NRW1 208 aa11.19□□□□□ -0.62
COL12A1-203ENST00000416123 CPA4Q9UI42 421 aa11.19□□□□□ -0.62
COL12A1-203ENST00000416123 PRG3Q9Y2Y8 225 aaPredicted RBP11.19□□□□□ -0.62
COL12A1-203ENST00000416123 PDS5AQ29RF7 1337 aaKnown RBP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 MEGF6O75095 1541 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 RGL2O15211 777 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 GCKP35557 465 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 DEUP1Q05D60 604 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 NBPF12Q5TAG4 269 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 ATP11CQ8NB49 1132 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 BTBD6Q96KE9 485 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 MED15Q96RN5 788 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 EEF2KO00418 725 aaKnown RBP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 SLC16A3O15427 465 aaKnown RBP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 ST8SIA6P61647 398 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 GPAT2Q6NUI2 795 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 RGS9BPQ6ZS82 235 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 CALR3Q96L12 384 aaKnown RBP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 TRIM62Q9BVG3 475 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 TRIM15Q9C019 465 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 TADA3O75528 432 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 DCTN3O75935 186 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 KIF17Q9P2E2 1029 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 IGSF9BQ9UPX0 1349 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 PTPRUQ92729 1446 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 GALCP54803 685 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 EFTUD2Q15029 972 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 C10orf120Q5SQS8 335 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 TTC39CQ8N584 583 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 WDR24Q96S15 920 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 LSM7Q9UK45 103 aaKnown RBP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 EXTL3O43909 919 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 HBP1O60381 514 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 CSDE1O75534 798 aaKnown RBP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 RPS12P25398 132 aaKnown RBP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 CAP2P40123 477 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 ERFP50548 548 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 RAD51Q06609 339 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 SCFD2Q8WU76 684 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 OTULINQ96BN8 352 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 TMCC1O94876 653 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 BRAFP15056 766 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 HIBCHQ6NVY1 386 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 CHST13Q8NET6 341 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 GIPC2Q8TF65 315 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 ELMO2Q96JJ3 720 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 BFARQ9NZS9 450 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 TRIM33Q9UPN9 1127 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 IL18RAPO95256 599 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 ICAM1P05362 532 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 GFAPP14136 432 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 PDAP1Q13442 181 aaKnown RBP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 LAMC2Q13753 1193 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 MORF4L2Q15014 288 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 HS6ST3Q8IZP7 471 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 ZNF513Q8N8E2 541 aaPredicted RBP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 RUSC1Q9BVN2 902 aa11.18□□□□□ -0.62
COL12A1-203ENST00000416123 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL12A1-203ENST00000416123 ATP8B1O43520 1251 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 CSE1LP55060 971 aaKnown RBP11.17□□□□□ -0.62
COL12A1-203ENST00000416123 RCOR2Q8IZ40 523 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 LZICQ8WZA0 190 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 PRMT1Q99873 361 aaKnown RBP11.17□□□□□ -0.62
COL12A1-203ENST00000416123 TRIM51Q9BSJ1 452 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 DPP3Q9NY33 737 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 NAGPAQ9UK23 515 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 RAP1GAPP47736 663 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 SYTL3Q4VX76 610 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 NUDT18Q6ZVK8 323 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 STKLD1Q8NE28 680 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 SH3TC2Q8TF17 1288 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 GGT7Q9UJ14 662 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 ASAP2O43150 1006 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 MAP4P27816 1152 aaKnown RBP11.17□□□□□ -0.62
COL12A1-203ENST00000416123 SOX11P35716 441 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 RFC5P40937 340 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 ALDH7A1P49419 539 aaKnown RBP11.17□□□□□ -0.62
COL12A1-203ENST00000416123 CASP4P49662 377 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 ADCK2Q7Z695 626 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 LRRC1Q9BTT6 524 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 GOLPH3Q9H4A6 298 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 MSH4O15457 936 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 RFX5P48382 616 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-203ENST00000416123 CDC42EP1Q00587 391 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 TUBB6Q9BUF5 446 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-203ENST00000416123 ADARB2Q9NS39 739 aaKnown RBP11.17□□□□□ -0.62
COL12A1-203ENST00000416123 TBX20Q9UMR3 447 aa11.17□□□□□ -0.62
COL12A1-203ENST00000416123 GRID2IPA4D2P6 1211 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms