RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 TBKBP1A7MCY6 615 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 PTGESO14684 152 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 MEFVO15553 781 aaPredicted RBP9.03□□□□□ -0.96
RBM39-208ENST00000416108 OFD1O75665 1012 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 VNN1O95497 513 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 ASS1P00966 412 aaKnown RBP9.03□□□□□ -0.96
RBM39-208ENST00000416108 GYPCP04921 128 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 CCDC172P0C7W6 258 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 FGFR1P11362 822 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 UCHL3P15374 230 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 LRPAP1P30533 357 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 RPL9P32969 192 aaKnown RBP9.03□□□□□ -0.96
RBM39-208ENST00000416108 STAT1P42224 750 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 TAF6P49848 677 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 GUCY2FP51841 1108 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 MYL6P60660 151 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 ZBED6P86452 979 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 TUSC3Q13454 348 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 KLHDC7AQ5VTJ3 777 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 IQCEQ6IPM2 695 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.03□□□□□ -0.966e-19■■■■■ 56.7
RBM39-208ENST00000416108 RRAGAQ7L523 313 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 LRRC52Q8N7C0 313 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 SEMA4DQ92854 862 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 C18orf25Q96B23 403 aaPredicted RBP9.03□□□□□ -0.96
RBM39-208ENST00000416108 DDX27Q96GQ7 796 aaKnown RBP9.03□□□□□ -0.96
RBM39-208ENST00000416108 HPDLQ96IR7 371 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 FAM84AQ96KN4 292 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 PPP1R10Q96QC0 940 aaKnown RBP9.03□□□□□ -0.96
RBM39-208ENST00000416108 NIF3L1Q9GZT8 377 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 GANQ9H2C0 597 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.03□□□□□ -0.962e-6■■■□□ 15.1
RBM39-208ENST00000416108 NXF1Q9UBU9 619 aaKnown RBP9.03□□□□□ -0.96
RBM39-208ENST00000416108 FBXL5Q9UKA1 691 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 CAPN11Q9UMQ6 739 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 FHOD1Q9Y613 1164 aa9.03□□□□□ -0.96
RBM39-208ENST00000416108 ARHGEF37A1IGU5 675 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 CASTOR2A6NHX0 329 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 PODXLO00592 558 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 INPPL1O15357 1258 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 STAU1O95793 577 aaKnown RBP9.02□□□□□ -0.97
RBM39-208ENST00000416108 CST3P01034 146 aaPredicted RBP9.02□□□□□ -0.97
RBM39-208ENST00000416108 PAX3P23760 479 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 USP8P40818 1118 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 ADKP55263 362 aaKnown RBP9.02□□□□□ -0.97
RBM39-208ENST00000416108 WDR5P61964 334 aaKnown RBP9.02□□□□□ -0.97
RBM39-208ENST00000416108 GCNT1Q02742 428 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 TBX2Q13207 712 aaPredicted RBP9.02□□□□□ -0.97
RBM39-208ENST00000416108 CUL2Q13617 745 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 DRAP1Q14919 205 aaPredicted RBP9.02□□□□□ -0.97
RBM39-208ENST00000416108 ZBTB6Q15916 424 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 ASIC2Q16515 512 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 TCTN1Q2MV58 587 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 CLLU1OSQ5K130 101 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 SPOUT1Q5T280 376 aaKnown RBP9.02□□□□□ -0.97
RBM39-208ENST00000416108 SFMBT2Q5VUG0 894 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 C9orf57Q5W0N0 161 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 SPOPLQ6IQ16 392 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 PDXDC1Q6P996 788 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 GJB7Q6PEY0 223 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 ZNF365Q70YC5 407 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 OTOP2Q7RTS6 562 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 ARHGEF19Q8IW93 802 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 LRRC43Q8N309 656 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 CCDC112Q8NEF3 446 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 OR8K1Q8NGG5 319 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 LMO3Q8TAP4 145 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 FAXDC2Q96IV6 333 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 STK33Q9BYT3 514 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 CXCL16Q9H2A7 254 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 SIX2Q9NPC8 291 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 RNF19AQ9NV58 838 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 TBC1D13Q9NVG8 400 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 MIOSQ9NXC5 875 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 SIX4Q9UIU6 781 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 MYO6Q9UM54 1294 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 NUB1Q9Y5A7 615 aa9.02□□□□□ -0.97
RBM39-208ENST00000416108 ANO9A1A5B4 782 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 CARNS1A5YM72 827 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 LRRC53A6NM62 1247 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 PIRO00625 290 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 EPHB6O15197 1021 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 LRRN2O75325 713 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 NOL4O94818 638 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 KRT5P13647 590 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 FERP16591 822 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 SOX5P35711 763 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 OR1G1P47890 313 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 FXR1P51114 621 aaKnown RBP eCLIP9.01□□□□□ -0.97
RBM39-208ENST00000416108 APBA1Q02410 837 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 SOX4Q06945 474 aaPredicted RBP9.01□□□□□ -0.97
RBM39-208ENST00000416108 WDR72Q3MJ13 1102 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 PAN2Q504Q3 1202 aaKnown RBP9.01□□□□□ -0.97
RBM39-208ENST00000416108 TDRD12Q587J7 1177 aaKnown RBP9.01□□□□□ -0.97
RBM39-208ENST00000416108 PHLDB3Q6NSJ2 640 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 FAM117BQ6P1L5 589 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 DSTYKQ6XUX3 929 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 SCARA5Q6ZMJ2 495 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 TTC39CQ8N584 583 aa9.01□□□□□ -0.97
RBM39-208ENST00000416108 GSTCDQ8NEC7 633 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms