RNA–Protein interactions for RNA: ENST00000415948.5

CRAT-203, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-203ENST00000415948 TKTP29401 623 aaKnown RBP16.67■□□□□ 0.26
CRAT-203ENST00000415948 PPM1AP35813 382 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 PPP1R2P41236 205 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 VAMP7P51809 220 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 RBM10P98175 930 aaKnown RBP16.67■□□□□ 0.26
CRAT-203ENST00000415948 CBWD6Q4V339 395 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 CBWD3Q5JTY5 395 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 CBWD5Q5RIA9 395 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 PLPP4Q5VZY2 271 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 TRAPPC11Q7Z392 1133 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 VPS52Q8N1B4 723 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 BEST2Q8NFU1 509 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 FEZF2Q8TBJ5 459 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 TMC2Q8TDI7 906 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 SLC35C1Q96A29 364 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 TMEM169Q96HH4 297 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 CEP63Q96MT8 703 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 AAASQ9NRG9 546 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 SAMSN1Q9NSI8 373 aaKnown RBP16.67■□□□□ 0.26
CRAT-203ENST00000415948 FRMD4BQ9Y2L6 1034 aa16.67■□□□□ 0.26
CRAT-203ENST00000415948 BICDL2A1A5D9 508 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 ADAM12O43184 909 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 HCRTO43612 131 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 LILRB3O75022 631 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 TNNI1P19237 187 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 PTMSP20962 102 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 RPL13P26373 211 aaKnown RBP16.66■□□□□ 0.26
CRAT-203ENST00000415948 ERCC5P28715 1186 aaPredicted RBP16.66■□□□□ 0.26
CRAT-203ENST00000415948 GCLMP48507 274 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 PTPN14Q15678 1187 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 DCLRE1AQ6PJP8 1040 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 SASS6Q6UVJ0 657 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 PRSS55Q6UWB4 352 aaPredicted RBP16.66■□□□□ 0.26
CRAT-203ENST00000415948 RSPO2Q6UXX9 243 aaPredicted RBP16.66■□□□□ 0.26
CRAT-203ENST00000415948 FILIP1Q7Z7B0 1213 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 SEMA4DQ92854 862 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 DDX27Q96GQ7 796 aaKnown RBP16.66■□□□□ 0.26
CRAT-203ENST00000415948 UROC1Q96N76 676 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 COLEC11Q9BWP8 271 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 XYLT2Q9H1B5 865 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 MMRN2Q9H8L6 949 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.66■□□□□ 0.26
CRAT-203ENST00000415948 CHST7Q9NS84 486 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 AGAP1Q9UPQ3 857 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 NME7Q9Y5B8 376 aa16.66■□□□□ 0.26
CRAT-203ENST00000415948 TIMM13Q9Y5L4 95 aaPredicted RBP16.66■□□□□ 0.26
CRAT-203ENST00000415948 SOD2P04179 222 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 TMEM191BP0C7N4 346 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 EPB41P11171 864 aaKnown RBP16.65■□□□□ 0.26
CRAT-203ENST00000415948 RPL17P18621 184 aaKnown RBP16.65■□□□□ 0.26
CRAT-203ENST00000415948 RPL9P32969 192 aaKnown RBP16.65■□□□□ 0.26
CRAT-203ENST00000415948 LILRA4P59901 499 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 ZACNQ401N2 412 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 KIAA0319Q5VV43 1072 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 INTS8Q75QN2 995 aaKnown RBP16.65■□□□□ 0.26
CRAT-203ENST00000415948 SV2AQ7L0J3 742 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 NT5DC4Q86YG4 428 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 TRIM59Q8IWR1 403 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 DHX40Q8IX18 779 aaKnown RBP16.65■□□□□ 0.26
CRAT-203ENST00000415948 VN1R2Q8NFZ6 395 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 TAS1R2Q8TE23 839 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 SYAP1Q96A49 352 aaPredicted RBP16.65■□□□□ 0.26
CRAT-203ENST00000415948 MRPL38Q96DV4 380 aaKnown RBP16.65■□□□□ 0.26
CRAT-203ENST00000415948 CNOT6LQ96LI5 555 aaKnown RBP16.65■□□□□ 0.26
CRAT-203ENST00000415948 FNBP1Q96RU3 617 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 TSPAN18Q96SJ8 248 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 TCF25Q9BQ70 676 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 TLR9Q9NR96 1032 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 ANO10Q9NW15 660 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 LZTS1Q9Y250 596 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 COL6A3P12111 3177 aa16.65■□□□□ 0.26
CRAT-203ENST00000415948 TADA2AO75478 443 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 CTSAP10619 480 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 POU3F3P20264 500 aaPredicted RBP16.64■□□□□ 0.25
CRAT-203ENST00000415948 FGFR3P22607 806 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 MARSP56192 900 aaKnown RBP16.64■□□□□ 0.25
CRAT-203ENST00000415948 MYL6P60660 151 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 SURF1Q15526 300 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 CCDC142Q17RM4 750 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 DCAF17Q5H9S7 520 aaPredicted RBP16.64■□□□□ 0.25
CRAT-203ENST00000415948 FAM171A1Q5VUB5 890 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 CDKAL1Q5VV42 579 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 SPOPLQ6IQ16 392 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 OSTM1Q86WC4 334 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 AOPEPQ8N6M6 819 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 ANKRD36BP1Q96IX9 119 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 SUSD3Q96L08 255 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 RTP3Q9BQQ7 232 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 PI4K2AQ9BTU6 479 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 APOBEC3GQ9HC16 384 aaKnown RBP16.64■□□□□ 0.25
CRAT-203ENST00000415948 ITGA11Q9UKX5 1188 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 POLIQ9UNA4 740 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 PRUNE2Q8WUY3 3088 aa16.64■□□□□ 0.25
CRAT-203ENST00000415948 C2orf71A6NGG8 1288 aa16.63■□□□□ 0.25
CRAT-203ENST00000415948 M0QZQ0 153 aa16.63■□□□□ 0.25
CRAT-203ENST00000415948 C2CD2LO14523 706 aa16.63■□□□□ 0.25
CRAT-203ENST00000415948 HLA-DRAP01903 254 aa16.63■□□□□ 0.25
CRAT-203ENST00000415948 TNNC2P02585 160 aa16.63■□□□□ 0.25
CRAT-203ENST00000415948 KRT19P08727 400 aa16.63■□□□□ 0.25
CRAT-203ENST00000415948 IGFBP4P22692 258 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms