RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 GRIN1Q05586 938 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 CRHR2Q13324 411 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 KRT72Q14CN4 511 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 KRBA2Q6ZNG9 492 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 COPS6Q7L5N1 327 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 SRGAP1Q7Z6B7 1085 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 RBM12BQ8IXT5 1001 aaKnown RBP7.17□□□□□ -1.26
EPHA4-204ENST00000415749 ZBTB34Q8NCN2 500 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 POF1BQ8WVV4 589 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 JADE3Q92613 823 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 ACO2Q99798 780 aaKnown RBP7.17□□□□□ -1.26
EPHA4-204ENST00000415749 CSRNP2Q9H175 543 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 MS4A5Q9H3V2 200 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 BCAS3Q9H6U6 928 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 ACSS2Q9NR19 701 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 FNIP2Q9P278 1114 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 MBD1Q9UIS9 605 aaPredicted RBP7.17□□□□□ -1.26
EPHA4-204ENST00000415749 TELO2Q9Y4R8 837 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 B3GALT1Q9Y5Z6 326 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 MYOCOSA0A1B0GUC4 107 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 PRAMEF25A6NGN4 478 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 WNT10BO00744 389 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 BUB1BO60566 1050 aaPredicted RBP7.16□□□□□ -1.26
EPHA4-204ENST00000415749 PQBP1O60828 265 aaKnown RBP7.16□□□□□ -1.26
EPHA4-204ENST00000415749 UFL1O94874 794 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 ZBED1O96006 694 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 ANXA1P04083 346 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 ZKSCAN1P17029 563 aaPredicted RBP7.16□□□□□ -1.26
EPHA4-204ENST00000415749 SLC9A1P19634 815 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 LSP1P33241 339 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 MAN1A1P33908 653 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 KIF11P52732 1056 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 CACNB2Q08289 660 aaPredicted RBP7.16□□□□□ -1.26
EPHA4-204ENST00000415749 AIMP1Q12904 312 aaKnown RBP7.16□□□□□ -1.26
EPHA4-204ENST00000415749 CPZQ66K79 652 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 CC2D1AQ6P1N0 951 aaPredicted RBP7.16□□□□□ -1.26
EPHA4-204ENST00000415749 CCDC149Q6ZUS6 474 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 MIER2Q8N344 545 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 FAM156AQ8NDB6 213 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 MZB1Q8WU39 189 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 TGFBRAP1Q8WUH2 860 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 DLG3Q92796 817 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 CFAP53Q96M91 514 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 PRO3102Q9H379 93 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 CNTD2Q9H8S5 307 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 FAM204AQ9H8W3 233 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 CCM2LQ9NUG4 571 aaPredicted RBP7.16□□□□□ -1.26
EPHA4-204ENST00000415749 C9orf78Q9NZ63 289 aaPredicted RBP7.16□□□□□ -1.26
EPHA4-204ENST00000415749 HSPBP1Q9NZL4 362 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 FZD1Q9UP38 647 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 NR2E3Q9Y5X4 410 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 IRS2Q9Y4H2 1338 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 SZT2Q5T011 3432 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 DUOX1Q9NRD9 1551 aa7.16□□□□□ -1.26
EPHA4-204ENST00000415749 FAM90A27PA6NNH2 459 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 CYP17A1P05093 508 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 COL6A1P12109 1028 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 HERVK_113P62684 666 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 DDX10Q13206 875 aaKnown RBP7.15□□□□□ -1.26
EPHA4-204ENST00000415749 BIRC3Q13489 604 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 PROSER3Q2NL68 480 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 GRAMD1CQ8IYS0 662 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 KIAA1958Q8N8K9 716 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 FAM89AQ96GI7 184 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 CLMNQ96JQ2 1002 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 FAM193BQ96PV7 902 aaPredicted RBP7.15□□□□□ -1.26
EPHA4-204ENST00000415749 PTPN18Q99952 460 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 TOMM22Q9NS69 142 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 ZNF69Q9UC07 566 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 SPO11Q9Y5K1 396 aa7.15□□□□□ -1.26
EPHA4-204ENST00000415749 ANKRD36CQ5JPF3 1778 aa7.15□□□□□ -1.27
EPHA4-204ENST00000415749 RBBP6Q7Z6E9 1792 aaKnown RBP7.15□□□□□ -1.27
EPHA4-204ENST00000415749 SCN9AQ15858 1988 aa7.15□□□□□ -1.27
EPHA4-204ENST00000415749 A0A1W2PPC1 479 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 LCHNA4D1U4 455 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 N4BP3O15049 544 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 C4BPAP04003 597 aaKnown RBP7.14□□□□□ -1.27
EPHA4-204ENST00000415749 CYP2C8P10632 490 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 SDHAP31040 664 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 CDR1P51861 262 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 PHC1P78364 1004 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 SMAD3P84022 425 aaKnown RBP7.14□□□□□ -1.27
EPHA4-204ENST00000415749 TMEM132BQ14DG7 1078 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 PDCD1Q15116 288 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 SMAD2Q15796 467 aaKnown RBP7.14□□□□□ -1.27
EPHA4-204ENST00000415749 ATAT1Q5SQI0 421 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 LILRA6Q6PI73 481 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 TEPPQ6URK8 271 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 CD300LDQ6UXZ3 194 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 APOBEC3FQ8IUX4 373 aaKnown RBP7.14□□□□□ -1.27
EPHA4-204ENST00000415749 ZNF610Q8N9Z0 462 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 DIS3LQ8TF46 1054 aaKnown RBP7.14□□□□□ -1.27
EPHA4-204ENST00000415749 ATXN2LQ8WWM7 1075 aaKnown RBP7.14□□□□□ -1.27
EPHA4-204ENST00000415749 KCNN1Q92952 543 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 HPS3Q969F9 1004 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 CCDC138Q96M89 665 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 ELF4Q99607 663 aaPredicted RBP7.14□□□□□ -1.27
EPHA4-204ENST00000415749 PAGR1Q9BTK6 254 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 HTATIP2Q9BUP3 242 aa7.14□□□□□ -1.27
EPHA4-204ENST00000415749 SELENOOQ9BVL4 669 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms