RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ZNF280DQ6N043 979 aa27.16■■□□□ 1.94
HLA-C-204ENST00000415537 SLC39A4Q6P5W5 647 aa27.16■■□□□ 1.94
HLA-C-204ENST00000415537 ZNF720Q7Z2F6 126 aa27.16■■□□□ 1.94
HLA-C-204ENST00000415537 PRSS33Q8NF86 280 aa27.16■■□□□ 1.94
HLA-C-204ENST00000415537 MRPL44Q9H9J2 332 aaKnown RBP27.16■■□□□ 1.94
HLA-C-204ENST00000415537 CPSF3Q9UKF6 684 aaKnown RBP27.16■■□□□ 1.94
HLA-C-204ENST00000415537 PCDHB8Q9UN66 801 aa27.16■■□□□ 1.94
HLA-C-204ENST00000415537 ZDBF2Q9HCK1 2354 aa27.16■■□□□ 1.94
HLA-C-204ENST00000415537 WDR27A2RRH5 827 aa27.15■■□□□ 1.94
HLA-C-204ENST00000415537 MYMKA6NI61 221 aa27.15■■□□□ 1.94
HLA-C-204ENST00000415537 ANKRD63C9JTQ0 380 aa27.15■■□□□ 1.94
HLA-C-204ENST00000415537 PRRG1O14668 218 aa27.15■■□□□ 1.94
HLA-C-204ENST00000415537 ABLIM3O94929 683 aa27.15■■□□□ 1.94
HLA-C-204ENST00000415537 LRG1P02750 347 aa27.15■■□□□ 1.94
HLA-C-204ENST00000415537 GAP43P17677 238 aa27.15■■□□□ 1.94
HLA-C-204ENST00000415537 HOXD11P31277 338 aaPredicted RBP27.15■■□□□ 1.94
HLA-C-204ENST00000415537 NASPP49321 788 aaPredicted RBP27.15■■□□□ 1.94
HLA-C-204ENST00000415537 SLC44A3Q8N4M1 653 aa27.15■■□□□ 1.94
HLA-C-204ENST00000415537 HVCN1Q96D96 273 aa27.15■■□□□ 1.94
HLA-C-204ENST00000415537 ZNF396Q96N95 335 aaPredicted RBP27.15■■□□□ 1.94
HLA-C-204ENST00000415537 FBXL5Q9UKA1 691 aa27.15■■□□□ 1.94
HLA-C-204ENST00000415537 CDH7Q9ULB5 785 aa27.15■■□□□ 1.94
HLA-C-204ENST00000415537 TBC1D4O60343 1298 aa27.14■■□□□ 1.94
HLA-C-204ENST00000415537 ATF2P15336 505 aa27.14■■□□□ 1.94
HLA-C-204ENST00000415537 PABPC1LQ4VXU2 614 aaKnown RBP27.14■■□□□ 1.94
HLA-C-204ENST00000415537 BEST2Q8NFU1 509 aa27.14■■□□□ 1.94
HLA-C-204ENST00000415537 NARSO43776 548 aaKnown RBP27.13■■□□□ 1.93
HLA-C-204ENST00000415537 ADRB2P07550 413 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 PDIA4P13667 645 aaKnown RBP27.13■■□□□ 1.93
HLA-C-204ENST00000415537 IDEP14735 1019 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 ACOT2P49753 483 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 NUBP1P53384 320 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 TPGS2Q68CL5 300 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 ASTLQ6HA08 431 aaPredicted RBP27.13■■□□□ 1.93
HLA-C-204ENST00000415537 JADE1Q6IE81 842 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 DSTYKQ6XUX3 929 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 TMEM130Q8N3G9 435 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 LINC00301Q8NCQ3 95 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 FLCNQ8NFG4 579 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 DNAJC19Q96DA6 116 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 CYP4F11Q9HBI6 524 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 HCFC1R1Q9NWW0 138 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 TBC1D7Q9P0N9 293 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 DNMT3BQ9UBC3 853 aaKnown RBP27.13■■□□□ 1.93
HLA-C-204ENST00000415537 AGO2Q9UKV8 859 aaKnown RBP27.13■■□□□ 1.93
HLA-C-204ENST00000415537 EXOC7Q9UPT5 735 aa27.13■■□□□ 1.93
HLA-C-204ENST00000415537 M0QZQ0 153 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 SPTLC2O15270 562 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 CFHP08603 1231 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 GUCY2FP51841 1108 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 YWHAHQ04917 246 aaPredicted RBP27.12■■□□□ 1.93
HLA-C-204ENST00000415537 POSTNQ15063 836 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 SPATA1Q5VX52 437 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 USP37Q86T82 979 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 PDILTQ8N807 584 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 POMGNT1Q8WZA1 660 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 FGF13Q92913 245 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 TFIP11Q9UBB9 837 aaKnown RBP27.12■■□□□ 1.93
HLA-C-204ENST00000415537 WNT16Q9UBV4 365 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 STYXL1Q9Y6J8 313 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 NUMBLQ9Y6R0 609 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 ANK1P16157 1881 aa27.12■■□□□ 1.93
HLA-C-204ENST00000415537 ARHGEF37A1IGU5 675 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 TISP43B9A030 160 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 ANHXE9PGG2 379 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 GCNT3O95395 438 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 SRFP11831 508 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 CPB1P15086 417 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 CLCN5P51795 746 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 HTR4Q13639 388 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 TMEM132DQ14C87 1099 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 FOXD4L5Q5VV16 416 aaPredicted RBP27.11■■□□□ 1.93
HLA-C-204ENST00000415537 TCEAL8Q8IYN2 117 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 SIX5Q8N196 739 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 ITFG1Q8TB96 612 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 FOXD4L4Q8WXT5 416 aaPredicted RBP27.11■■□□□ 1.93
HLA-C-204ENST00000415537 ACCSQ96QU6 501 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 OXCT2Q9BYC2 517 aaPredicted RBP27.11■■□□□ 1.93
HLA-C-204ENST00000415537 IRF2BPLQ9H1B7 796 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 ASB7Q9H672 318 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 KCNH3Q9ULD8 1083 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 DERAQ9Y315 318 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 PCDHB13Q9Y5F0 798 aa27.11■■□□□ 1.93
HLA-C-204ENST00000415537 A0A087X0B3 334 aa27.1■■□□□ 1.93
HLA-C-204ENST00000415537 PPP6R2O75170 966 aa27.1■■□□□ 1.93
HLA-C-204ENST00000415537 PTPN2P17706 415 aa27.1■■□□□ 1.93
HLA-C-204ENST00000415537 ADCY1Q08828 1119 aa27.1■■□□□ 1.93
HLA-C-204ENST00000415537 TCF15Q12870 199 aa27.1■■□□□ 1.93
HLA-C-204ENST00000415537 MTSS1LQ765P7 747 aa27.1■■□□□ 1.93
HLA-C-204ENST00000415537 ALYREFQ86V81 257 aaKnown RBP27.1■■□□□ 1.93
HLA-C-204ENST00000415537 PANK4Q9NVE7 773 aa27.1■■□□□ 1.93
HLA-C-204ENST00000415537 AFF4Q9UHB7 1163 aaKnown RBP27.1■■□□□ 1.93
HLA-C-204ENST00000415537 MAFFQ9ULX9 164 aa27.1■■□□□ 1.93
HLA-C-204ENST00000415537 MRPS23Q9Y3D9 190 aaKnown RBP27.1■■□□□ 1.93
HLA-C-204ENST00000415537 TIMM13Q9Y5L4 95 aaPredicted RBP27.1■■□□□ 1.93
HLA-C-204ENST00000415537 NOTCH4Q99466 2003 aa27.1■■□□□ 1.93
HLA-C-204ENST00000415537 STK25O00506 426 aa27.09■■□□□ 1.93
HLA-C-204ENST00000415537 PPP1R37O75864 691 aa27.09■■□□□ 1.93
HLA-C-204ENST00000415537 RHOP08100 348 aa27.09■■□□□ 1.93
HLA-C-204ENST00000415537 NFICP08651 508 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms