RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 ELOA2Q8IYF1 753 aaPredicted RBP27.4■■□□□ 1.98
CPNE1-207ENST00000414664 XXYLT1Q8NBI6 393 aa27.4■■□□□ 1.98
CPNE1-207ENST00000414664 SMRP1Q8NCR6 262 aa27.4■■□□□ 1.98
CPNE1-207ENST00000414664 SUSD3Q96L08 255 aa27.4■■□□□ 1.98
CPNE1-207ENST00000414664 IPO9Q96P70 1041 aaKnown RBP27.4■■□□□ 1.98
CPNE1-207ENST00000414664 DPP3Q9NY33 737 aa27.4■■□□□ 1.98
CPNE1-207ENST00000414664 ANK1P16157 1881 aa27.4■■□□□ 1.98
CPNE1-207ENST00000414664 I3L4J1 428 aa27.39■■□□□ 1.98
CPNE1-207ENST00000414664 MBTPS2O43462 519 aa27.39■■□□□ 1.98
CPNE1-207ENST00000414664 GADD45BO75293 160 aaPredicted RBP27.39■■□□□ 1.98
CPNE1-207ENST00000414664 GLUD1P00367 558 aa27.39■■□□□ 1.98
CPNE1-207ENST00000414664 EPCAMP16422 314 aa27.39■■□□□ 1.98
CPNE1-207ENST00000414664 TKTP29401 623 aaKnown RBP27.39■■□□□ 1.98
CPNE1-207ENST00000414664 CYP2J2P51589 502 aa27.39■■□□□ 1.98
CPNE1-207ENST00000414664 GUCY2FP51841 1108 aa27.39■■□□□ 1.98
CPNE1-207ENST00000414664 APPL2Q8NEU8 664 aa27.39■■□□□ 1.98
CPNE1-207ENST00000414664 ADAMTS19Q8TE59 1207 aa27.39■■□□□ 1.98
CPNE1-207ENST00000414664 FBXL18Q96ME1 805 aa27.39■■□□□ 1.98
CPNE1-207ENST00000414664 GSDMAQ96QA5 445 aa27.39■■□□□ 1.98
CPNE1-207ENST00000414664 SPDYE4A6NLX3 237 aa27.38■■□□□ 1.97
CPNE1-207ENST00000414664 PDXKO00764 312 aa27.38■■□□□ 1.97
CPNE1-207ENST00000414664 UBE2HP62256 183 aa27.38■■□□□ 1.97
CPNE1-207ENST00000414664 TFAMQ00059 246 aaKnown RBP27.38■■□□□ 1.97
CPNE1-207ENST00000414664 C9orf57Q5W0N0 161 aa27.38■■□□□ 1.97
CPNE1-207ENST00000414664 CBWD2Q8IUF1 395 aa27.38■■□□□ 1.97
CPNE1-207ENST00000414664 EFCAB13Q8IY85 973 aa27.38■■□□□ 1.97
CPNE1-207ENST00000414664 GTPBP4Q9BZE4 634 aaKnown RBP27.38■■□□□ 1.97
CPNE1-207ENST00000414664 H7C4K7 107 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 PIRO00625 290 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 IL9P15248 144 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 RPL17P18621 184 aaKnown RBP27.37■■□□□ 1.97
CPNE1-207ENST00000414664 ITIH3Q06033 890 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 SNRNP35Q16560 246 aaKnown RBP27.37■■□□□ 1.97
CPNE1-207ENST00000414664 CES5AQ6NT32 575 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 SYCE2Q6PIF2 218 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 DSTYKQ6XUX3 929 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 PALB2Q86YC2 1186 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 SMARCE1Q969G3 411 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 CLSTN3Q9BQT9 956 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 KCTD10Q9H3F6 313 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 PDE11AQ9HCR9 933 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 MTRRQ9UBK8 725 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 PCDHB8Q9UN66 801 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 BACE2Q9Y5Z0 518 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 XIRP2A4UGR9 3374 aa27.37■■□□□ 1.97
CPNE1-207ENST00000414664 ANO9A1A5B4 782 aa27.36■■□□□ 1.97
CPNE1-207ENST00000414664 ARHGEF37A1IGU5 675 aa27.36■■□□□ 1.97
CPNE1-207ENST00000414664 CALUO43852 315 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-207ENST00000414664 EXOC3O60645 756 aa27.36■■□□□ 1.97
CPNE1-207ENST00000414664 SMAD2Q15796 467 aaKnown RBP27.36■■□□□ 1.97
CPNE1-207ENST00000414664 GLYCTKQ8IVS8 523 aa27.36■■□□□ 1.97
CPNE1-207ENST00000414664 GUF1Q8N442 669 aaKnown RBP27.36■■□□□ 1.97
CPNE1-207ENST00000414664 RDH13Q8NBN7 331 aa27.36■■□□□ 1.97
CPNE1-207ENST00000414664 HDAC7Q8WUI4 952 aa27.36■■□□□ 1.97
CPNE1-207ENST00000414664 S1PR5Q9H228 398 aa27.36■■□□□ 1.97
CPNE1-207ENST00000414664 PLEKHA4Q9H4M7 779 aa27.36■■□□□ 1.97
CPNE1-207ENST00000414664 VWA8A3KMH1 1905 aa27.35■■□□□ 1.97
CPNE1-207ENST00000414664 TCF20Q9UGU0 1960 aaKnown RBP27.35■■□□□ 1.97
CPNE1-207ENST00000414664 M0QZQ0 153 aa27.35■■□□□ 1.97
CPNE1-207ENST00000414664 TMEM191BP0C7N4 346 aa27.35■■□□□ 1.97
CPNE1-207ENST00000414664 AARSP49588 968 aaKnown RBP eCLIP27.35■■□□□ 1.97
CPNE1-207ENST00000414664 WNT7BP56706 349 aa27.35■■□□□ 1.97
CPNE1-207ENST00000414664 LILRA4P59901 499 aa27.35■■□□□ 1.97
CPNE1-207ENST00000414664 MYBPC2Q14324 1141 aa27.35■■□□□ 1.97
CPNE1-207ENST00000414664 VARS2Q5ST30 1063 aaKnown RBP27.35■■□□□ 1.97
CPNE1-207ENST00000414664 SLC9A9Q8IVB4 645 aa27.35■■□□□ 1.97
CPNE1-207ENST00000414664 TMEM174Q8WUU8 243 aa27.35■■□□□ 1.97
CPNE1-207ENST00000414664 ANKRD36BP1Q96IX9 119 aa27.35■■□□□ 1.97
CPNE1-207ENST00000414664 UHRF1Q96T88 793 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-207ENST00000414664 COL25A1Q9BXS0 654 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-207ENST00000414664 ADAM7Q9H2U9 754 aa27.35■■□□□ 1.97
CPNE1-207ENST00000414664 SFXN1Q9H9B4 322 aa27.35■■□□□ 1.97
CPNE1-207ENST00000414664 USP15Q9Y4E8 981 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-207ENST00000414664 PCDHA5Q9Y5H7 936 aa27.35■■□□□ 1.97
CPNE1-207ENST00000414664 SPTBN5Q9NRC6 3674 aaKnown RBP27.35■■□□□ 1.97
CPNE1-207ENST00000414664 TGM5O43548 720 aa27.34■■□□□ 1.97
CPNE1-207ENST00000414664 PRPF40AO75400 957 aaKnown RBP27.34■■□□□ 1.97
CPNE1-207ENST00000414664 PNPLA4P41247 253 aa27.34■■□□□ 1.97
CPNE1-207ENST00000414664 TMEM130Q8N3G9 435 aa27.34■■□□□ 1.97
CPNE1-207ENST00000414664 SPATA20Q8TB22 786 aa27.34■■□□□ 1.97
CPNE1-207ENST00000414664 FNBP1Q96RU3 617 aa27.34■■□□□ 1.97
CPNE1-207ENST00000414664 MAN1C1Q9NR34 630 aa27.34■■□□□ 1.97
CPNE1-207ENST00000414664 PRKAG3Q9UGI9 489 aa27.34■■□□□ 1.97
CPNE1-207ENST00000414664 MAPK8IP1Q9UQF2 711 aa27.34■■□□□ 1.97
CPNE1-207ENST00000414664 TRAF3IP3Q9Y228 551 aa27.34■■□□□ 1.97
CPNE1-207ENST00000414664 R3HCC1Q9Y3T6 440 aaKnown RBP27.34■■□□□ 1.97
CPNE1-207ENST00000414664 PPEF2O14830 753 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 TNNC2P02585 160 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 OR1D2P34982 312 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 TAF6P49848 677 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 RAB33AQ14088 237 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 MRPL58Q14197 206 aaKnown RBP27.33■■□□□ 1.97
CPNE1-207ENST00000414664 PSMD6Q15008 389 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 DUOXA2Q1HG44 320 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 ZNF658Q5TYW1 1059 aaPredicted RBP27.33■■□□□ 1.97
CPNE1-207ENST00000414664 LILRA6Q6PI73 481 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 ZNF560Q96MR9 790 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 APOL5Q9BWW9 433 aa27.33■■□□□ 1.97
CPNE1-207ENST00000414664 OXCT2Q9BYC2 517 aaPredicted RBP27.33■■□□□ 1.97
CPNE1-207ENST00000414664 INTS13Q9NVM9 706 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms