RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ENOX2Q16206 610 aaKnown RBP6.93□□□□□ -1.3
USP54-202ENST00000413442 BMT2Q1RMZ1 405 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 ZC2HC1CQ53FD0 456 aaPredicted RBP6.93□□□□□ -1.3
USP54-202ENST00000413442 FAM26FQ5R3K3 315 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 LIN9Q5TKA1 542 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 ARMCX5Q6P1M9 558 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 EPM2AIP1Q7L775 607 aaPredicted RBP6.93□□□□□ -1.3
USP54-202ENST00000413442 TAS1R1Q7RTX1 841 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 METTL23Q86XA0 190 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 CEP57Q86XR8 500 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 SLC9A9Q8IVB4 645 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 TCEAL8Q8IYN2 117 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 THEM5Q8N1Q8 247 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 TMEM86AQ8N2M4 240 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 GPD1LQ8N335 351 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 LRRC52Q8N7C0 313 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 C2orf15Q8WU43 125 aaKnown RBP6.93□□□□□ -1.3
USP54-202ENST00000413442 BCL7CQ8WUZ0 217 aaPredicted RBP6.93□□□□□ -1.3
USP54-202ENST00000413442 EDAQ92838 391 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 KIF12Q96FN5 646 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 ZNF560Q96MR9 790 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 ZMAT2Q96NC0 199 aaKnown RBP6.93□□□□□ -1.3
USP54-202ENST00000413442 CLSTN3Q9BQT9 956 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 VN1R3Q9BXE9 311 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 WDR6Q9NNW5 1121 aaKnown RBP6.93□□□□□ -1.3
USP54-202ENST00000413442 RMND1Q9NWS8 449 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 BARX2Q9UMQ3 279 aaPredicted RBP6.93□□□□□ -1.3
USP54-202ENST00000413442 ASB3Q9Y575 518 aa6.93□□□□□ -1.3
USP54-202ENST00000413442 A0A087X0B3 334 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 PRR33A8MZF0 331 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 ANKRD63C9JTQ0 380 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 C2CD2LO14523 706 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 IKBKBO14920 756 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 MAPK13O15264 365 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 TGM5O43548 720 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 B4GALT3O60512 393 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 CXCL8P10145 99 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 ODC1P11926 461 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 PTPN2P17706 415 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 RPL13P26373 211 aaKnown RBP6.92□□□□□ -1.3
USP54-202ENST00000413442 ADSSP30520 456 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 MCM4P33991 863 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 OR1D2P34982 312 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 TUFMP49411 452 aaKnown RBP6.92□□□□□ -1.3
USP54-202ENST00000413442 TAF6P49848 677 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 MCCD1P59942 119 aaPredicted RBP6.92□□□□□ -1.3
USP54-202ENST00000413442 RBP5P82980 135 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 YWHAHQ04917 246 aaPredicted RBP6.92□□□□□ -1.3
USP54-202ENST00000413442 MYO1EQ12965 1108 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 GPR17Q13304 367 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 NFIL3Q16649 462 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 KNOP1Q1ED39 458 aaKnown RBP6.92□□□□□ -1.3
USP54-202ENST00000413442 DUOXA2Q1HG44 320 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 SV2CQ496J9 727 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 RTP2Q5QGT7 225 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 PPM1LQ5SGD2 360 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 SMYD5Q6GMV2 418 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 ZNF280DQ6N043 979 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 CD300LGQ6UXG3 332 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 CRELD2Q6UXH1 353 aaPredicted RBP6.92□□□□□ -1.3
USP54-202ENST00000413442 DSTYKQ6XUX3 929 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 RNF135Q8IUD6 432 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 BRSK2Q8IWQ3 736 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 ELMOD1Q8N336 334 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 CEP120Q8N960 986 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 XXYLT1Q8NBI6 393 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 LRRC15Q8TF66 581 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 E2F7Q96AV8 911 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 BORCS6Q96GS4 357 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 FAXDC2Q96IV6 333 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 ANKRD36BP1Q96IX9 119 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 MFSD14AQ96MC6 490 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 GSDMAQ96QA5 445 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 DNAI2Q9GZS0 605 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 HAPLN2Q9GZV7 340 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 IRF2BPLQ9H1B7 796 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 FAM124BQ9H5Z6 455 aaPredicted RBP6.92□□□□□ -1.3
USP54-202ENST00000413442 PIDD1Q9HB75 910 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 GDAP2Q9NXN4 497 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 DPP3Q9NY33 737 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 AFF4Q9UHB7 1163 aaKnown RBP6.92□□□□□ -1.3
USP54-202ENST00000413442 FBXW11Q9UKB1 542 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 ITGA11Q9UKX5 1188 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 ZDHHC9Q9Y397 364 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 ANK1P16157 1881 aa6.92□□□□□ -1.3
USP54-202ENST00000413442 REV3LO60673 3130 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 KPNA7A9QM74 516 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 RHOBTB3O94955 611 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 ZNF202O95125 648 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 SMC2O95347 1197 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 STAU1O95793 577 aaKnown RBP6.91□□□□□ -1.3
USP54-202ENST00000413442 TNNC2P02585 160 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 PFKFB1P16118 471 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 EPCAMP16422 314 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 TRIM21P19474 475 aaKnown RBP6.91□□□□□ -1.3
USP54-202ENST00000413442 ATICP31939 592 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 TNFSF9P41273 254 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 LHX1P48742 406 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 ACOT2P49753 483 aa6.91□□□□□ -1.3
USP54-202ENST00000413442 SOX4Q06945 474 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms