RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 SUCLG2Q96I99 432 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 NPAS2Q99743 824 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 CUEDC1Q9NWM3 386 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SLC4A4Q9Y6R1 1079 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 H7C0C1 242 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 BPNT1O95861 308 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 RALAP11233 206 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ATP5OP48047 213 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PLTPP55058 493 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 AARDQ4LEZ3 155 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 LDHAL6AQ6ZMR3 332 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 BNC2Q6ZN30 1099 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 JPH4Q96JJ6 628 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 RHOBTB2Q9BYZ6 727 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 DNAJC11Q9NVH1 559 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 TBCCD1Q9NVR7 557 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 RAB23Q9ULC3 237 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 TMA7Q9Y2S6 64 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 A0A1W2PQ72 361 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PLEKHG3A1L390 1219 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 RGSL1A5PLK6 1076 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PIK3R2O00459 728 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 MDM4O15151 490 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PSMD3O43242 534 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 BUB1O43683 1085 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SERPING1P05155 500 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SOAT1P35610 550 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 RBM34P42696 430 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 MAGEA1P43355 309 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 HNRNPH2P55795 449 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 EIF3EP60228 445 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 STXBP1P61764 594 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 RBBP7Q16576 425 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 GPATCH4Q5T3I0 446 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SFMBT2Q5VUG0 894 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 CREB3L3Q68CJ9 461 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 GADL1Q6ZQY3 521 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 EFL1Q7Z2Z2 1120 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 IFNLR1Q8IU57 520 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ANKMY2Q8IV38 441 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 CMTR2Q8IYT2 770 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 FAR1Q8WVX9 515 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 LRRC58Q96CX6 371 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PGAP3Q96FM1 320 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 VMP1Q96GC9 406 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 TSPAN18Q96SJ8 248 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 TEX13BQ9BXU2 312 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 EVA1BQ9NVM1 165 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 RIC8BQ9NVN3 520 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 NMRK1Q9NWW6 199 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ZSWIM5Q9P217 1185 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 WDR35Q9P2L0 1181 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 MOSPD1Q9UJG1 213 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PCDHA2Q9Y5H9 948 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 CNPP09543 421 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 TATP17735 454 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 MNDAP41218 407 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 RESTQ13127 1097 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 EIF4A2Q14240 407 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 STARD3Q14849 445 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 PTGES3Q15185 160 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 E2F5Q15329 346 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 TTMPQ5BVD1 217 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SNAP47Q5SQN1 464 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 Q8N402 240 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 EXOC6Q8TAG9 804 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 GIPC3Q8TF64 312 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 HASPINQ8TF76 798 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 HNRNPABQ99729 332 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 DYRK4Q9NR20 520 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 ZNF624Q9P2J8 865 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 HPCAL4Q9UM19 191 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 FAM170AA1A519 330 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 FAM172BPA6NC97 362 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 ZNF432O94892 652 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CD2BP2O95400 341 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 IFNB1P01574 187 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 UQCRBP14927 111 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 TTKP33981 857 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 FNTAP49354 379 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 EIF2B2P49770 351 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 LRRC63Q05C16 580 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SLC20A2Q08357 652 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 LAMB3Q13751 1172 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CCNIQ14094 377 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 IFIT1BQ5T764 474 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 SPATA21Q7Z572 469 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 TIGD4Q8IY51 512 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 ATG16L2Q8NAA4 619 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 CALR3Q96L12 384 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 ADPGKQ9BRR6 497 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 TAF1DQ9H5J8 278 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 NOL6Q9H6R4 1146 aaKnown RBP4.79□□□□□ -1.64
PTPN13-202ENST00000411767 MTMR10Q9NXD2 777 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 FIS1Q9Y3D6 152 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 E5RI56 91 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 TADA2AO75478 443 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 STARD3NLO95772 234 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 FGRP09769 529 aa4.79□□□□□ -1.64
PTPN13-202ENST00000411767 DBTP11182 482 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms