RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 DPP3Q9NY33 737 aa27.75■■■□□ 2.03
C2orf88-204ENST00000409870 STK39Q9UEW8 545 aa27.75■■■□□ 2.03
C2orf88-204ENST00000409870 PUF60Q9UHX1 559 aaKnown RBP27.75■■■□□ 2.03
C2orf88-204ENST00000409870 NCOR1O75376 2440 aa27.74■■■□□ 2.03
C2orf88-204ENST00000409870 TMEM191BP0C7N4 346 aa27.74■■■□□ 2.03
C2orf88-204ENST00000409870 LMBRD2Q68DH5 695 aaPredicted RBP27.74■■■□□ 2.03
C2orf88-204ENST00000409870 FUT10Q6P4F1 479 aa27.74■■■□□ 2.03
C2orf88-204ENST00000409870 CD300LGQ6UXG3 332 aa27.74■■■□□ 2.03
C2orf88-204ENST00000409870 INTS8Q75QN2 995 aaKnown RBP27.74■■■□□ 2.03
C2orf88-204ENST00000409870 OR5B17Q8NGF7 314 aa27.74■■■□□ 2.03
C2orf88-204ENST00000409870 TMC2Q8TDI7 906 aa27.74■■■□□ 2.03
C2orf88-204ENST00000409870 FAM84AQ96KN4 292 aa27.74■■■□□ 2.03
C2orf88-204ENST00000409870 MED15Q96RN5 788 aa27.74■■■□□ 2.03
C2orf88-204ENST00000409870 MTMR12Q9C0I1 747 aa27.74■■■□□ 2.03
C2orf88-204ENST00000409870 ANO9A1A5B4 782 aa27.73■■■□□ 2.03
C2orf88-204ENST00000409870 TADA2AO75478 443 aa27.73■■■□□ 2.03
C2orf88-204ENST00000409870 EPB41P11171 864 aaKnown RBP27.73■■■□□ 2.03
C2orf88-204ENST00000409870 IGFBP6P24592 240 aaPredicted RBP27.73■■■□□ 2.03
C2orf88-204ENST00000409870 CLDN10P78369 228 aa27.73■■■□□ 2.03
C2orf88-204ENST00000409870 ENPEPQ07075 957 aa27.73■■■□□ 2.03
C2orf88-204ENST00000409870 CT47A1Q5JQC4 288 aaPredicted RBP27.73■■■□□ 2.03
C2orf88-204ENST00000409870 C9orf57Q5W0N0 161 aa27.73■■■□□ 2.03
C2orf88-204ENST00000409870 CSGALNACT2Q8N6G5 542 aa27.73■■■□□ 2.03
C2orf88-204ENST00000409870 C1orf127Q8N9H9 656 aa27.73■■■□□ 2.03
C2orf88-204ENST00000409870 ANKRD36BP1Q96IX9 119 aa27.73■■■□□ 2.03
C2orf88-204ENST00000409870 TLR9Q9NR96 1032 aa27.73■■■□□ 2.03
C2orf88-204ENST00000409870 SF3B1O75533 1304 aaKnown RBP eCLIP27.72■■■□□ 2.034e-6■■■■■ 120.3
C2orf88-204ENST00000409870 LRRIQ3A6PVS8 624 aaPredicted RBP27.72■■■□□ 2.03
C2orf88-204ENST00000409870 TNNI1P19237 187 aa27.72■■■□□ 2.03
C2orf88-204ENST00000409870 ERCC5P28715 1186 aaPredicted RBP27.72■■■□□ 2.03
C2orf88-204ENST00000409870 BFSP1Q12934 665 aa27.72■■■□□ 2.03
C2orf88-204ENST00000409870 STX1AQ16623 288 aa27.72■■■□□ 2.03
C2orf88-204ENST00000409870 DUOXA2Q1HG44 320 aa27.72■■■□□ 2.03
C2orf88-204ENST00000409870 BORCS6Q96GS4 357 aa27.72■■■□□ 2.03
C2orf88-204ENST00000409870 POP1Q99575 1024 aaKnown RBP27.72■■■□□ 2.03
C2orf88-204ENST00000409870 HERC2P3Q9BVR0 1158 aa27.72■■■□□ 2.03
C2orf88-204ENST00000409870 GPR62Q9BZJ7 368 aa27.72■■■□□ 2.03
C2orf88-204ENST00000409870 NSUN3Q9H649 340 aaKnown RBP27.72■■■□□ 2.03
C2orf88-204ENST00000409870 ANO10Q9NW15 660 aa27.72■■■□□ 2.03
C2orf88-204ENST00000409870 ITGA11Q9UKX5 1188 aa27.72■■■□□ 2.03
C2orf88-204ENST00000409870 MYO7AQ13402 2215 aa27.71■■■□□ 2.03
C2orf88-204ENST00000409870 SCN1AP35498 2009 aa27.71■■■□□ 2.03
C2orf88-204ENST00000409870 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.71■■■□□ 2.03
C2orf88-204ENST00000409870 PIRO00625 290 aa27.71■■■□□ 2.03
C2orf88-204ENST00000409870 PPEF2O14830 753 aa27.71■■■□□ 2.03
C2orf88-204ENST00000409870 TNNC2P02585 160 aa27.71■■■□□ 2.03
C2orf88-204ENST00000409870 SOD2P04179 222 aa27.71■■■□□ 2.03
C2orf88-204ENST00000409870 VAMP7P51809 220 aa27.71■■■□□ 2.03
C2orf88-204ENST00000409870 MCCD1P59942 119 aaPredicted RBP27.71■■■□□ 2.03
C2orf88-204ENST00000409870 USP37Q86T82 979 aa27.71■■■□□ 2.03
C2orf88-204ENST00000409870 CXorf38Q8TB03 319 aa27.71■■■□□ 2.03
C2orf88-204ENST00000409870 ZBP1Q9H171 429 aa27.71■■■□□ 2.03
C2orf88-204ENST00000409870 BDP1A6H8Y1 2624 aa27.7■■■□□ 2.03
C2orf88-204ENST00000409870 FSCN2O14926 492 aa27.7■■■□□ 2.03
C2orf88-204ENST00000409870 ITGB3P05106 788 aa27.7■■■□□ 2.03
C2orf88-204ENST00000409870 KRT13P13646 458 aa27.7■■■□□ 2.03
C2orf88-204ENST00000409870 KCNA5P22460 613 aa27.7■■■□□ 2.03
C2orf88-204ENST00000409870 ERVFC1P60507 584 aa27.7■■■□□ 2.03
C2orf88-204ENST00000409870 DLG4P78352 724 aa27.7■■■□□ 2.03
C2orf88-204ENST00000409870 ELAVL2Q12926 359 aaKnown RBP27.7■■■□□ 2.03
C2orf88-204ENST00000409870 TCEAL5Q5H9L2 206 aa27.7■■■□□ 2.03
C2orf88-204ENST00000409870 FILIP1Q7Z7B0 1213 aa27.7■■■□□ 2.03
C2orf88-204ENST00000409870 VPS52Q8N1B4 723 aa27.7■■■□□ 2.03
C2orf88-204ENST00000409870 VWA8A3KMH1 1905 aa27.7■■■□□ 2.02
C2orf88-204ENST00000409870 LETM1O95202 739 aaPredicted RBP27.69■■■□□ 2.02
C2orf88-204ENST00000409870 IRS1P35568 1242 aa27.69■■■□□ 2.02
C2orf88-204ENST00000409870 AP3M2P53677 418 aa27.69■■■□□ 2.02
C2orf88-204ENST00000409870 TYRO3Q06418 890 aa27.69■■■□□ 2.02
C2orf88-204ENST00000409870 C1orf220Q5T0J3 134 aa27.69■■■□□ 2.02
C2orf88-204ENST00000409870 ZNF516Q92618 1163 aa27.69■■■□□ 2.02
C2orf88-204ENST00000409870 TCF25Q9BQ70 676 aa27.69■■■□□ 2.02
C2orf88-204ENST00000409870 SIX4Q9UIU6 781 aa27.69■■■□□ 2.02
C2orf88-204ENST00000409870 NUB1Q9Y5A7 615 aa27.69■■■□□ 2.02
C2orf88-204ENST00000409870 CSPG5O95196 566 aa27.68■■■□□ 2.02
C2orf88-204ENST00000409870 CTSAP10619 480 aa27.68■■■□□ 2.02
C2orf88-204ENST00000409870 POLR2BP30876 1174 aaKnown RBP27.68■■■□□ 2.02
C2orf88-204ENST00000409870 AARSP49588 968 aaKnown RBP eCLIP27.68■■■□□ 2.02
C2orf88-204ENST00000409870 LEXMQ3ZCV2 418 aa27.68■■■□□ 2.02
C2orf88-204ENST00000409870 PDE12Q6L8Q7 609 aaKnown RBP27.68■■■□□ 2.02
C2orf88-204ENST00000409870 TRAPPC11Q7Z392 1133 aa27.68■■■□□ 2.02
C2orf88-204ENST00000409870 ENTPD7Q9NQZ7 604 aa27.68■■■□□ 2.02
C2orf88-204ENST00000409870 IKBKBO14920 756 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 TRAPPC3O43617 180 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 BRCC3P46736 316 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 C11orf57Q6ZUT1 292 aaPredicted RBP27.67■■■□□ 2.02
C2orf88-204ENST00000409870 TAS1R1Q7RTX1 841 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 TMC7Q7Z402 723 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 SRRTQ9BXP5 876 aaKnown RBP27.67■■■□□ 2.02
C2orf88-204ENST00000409870 NGRNQ9NPE2 291 aaKnown RBP27.67■■■□□ 2.02
C2orf88-204ENST00000409870 CHST7Q9NS84 486 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 ARMCX3Q9UH62 379 aaPredicted RBP27.67■■■□□ 2.02
C2orf88-204ENST00000409870 FGFR1OPO95684 399 aaKnown RBP27.67■■■□□ 2.02
C2orf88-204ENST00000409870 TRIM49P0CI25 452 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 TRIM49CP0CI26 452 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 PAX3P23760 479 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 LILRA4P59901 499 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 USP41Q3LFD5 358 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 FAM171A1Q5VUB5 890 aa27.67■■■□□ 2.02
C2orf88-204ENST00000409870 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.67■■■□□ 2.02
C2orf88-204ENST00000409870 FRMD5Q7Z6J6 570 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms