RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 EPC1Q9H2F5 836 aa8.05□□□□□ -1.12
CXCR4-202ENST00000409817 C1orf112Q9NSG2 853 aa8.05□□□□□ -1.12
CXCR4-202ENST00000409817 L1RE1Q9UN81 338 aa8.05□□□□□ -1.12
CXCR4-202ENST00000409817 ADGRA2Q96PE1 1338 aa8.05□□□□□ -1.12
CXCR4-202ENST00000409817 A0A1W2PRU2 124 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 CLDN3O15551 220 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 SORBS3O60504 671 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 PEX10O60683 326 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 MTA2O94776 668 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 CLSTN1O94985 981 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 ARIH2O95376 493 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 FTCDO95954 541 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 GNRH1P01148 92 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 ZBTB48P10074 688 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 DLATP10515 647 aaKnown RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 TNNI1P19237 187 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 TBXAS1P24557 533 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 TNFRSF8P28908 595 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 CDR2Q01850 454 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 POU5F1Q01860 360 aaKnown RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 MAPK6Q16659 721 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 ZNF792Q3KQV3 632 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 HSDL1Q3SXM5 330 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 ZNF484Q5JVG2 852 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 WDR78Q5VTH9 848 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 EEPD1Q7L9B9 569 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 CYP2U1Q7Z449 544 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 PRPF31Q8WWY3 499 aaKnown RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 SEMA4DQ92854 862 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 KREMEN1Q96MU8 473 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 CGRRF1Q99675 332 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 MSTO1Q9BUK6 570 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 NFKBIZQ9BYH8 718 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 CCDC113Q9H0I3 377 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 VIPAS39Q9H9C1 493 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 ABCB6Q9NP58 842 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 RAB6BQ9NRW1 208 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 RBAKQ9NYW8 714 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 ERAP1Q9NZ08 941 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 NOCTQ9UK39 431 aaKnown RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 AMFRQ9UKV5 643 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 TTC7AQ9ULT0 858 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 USP3Q9Y6I4 520 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 ZNFX1Q9P2E3 1918 aaKnown RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 COL1A2P08123 1366 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 MIF4GDA9UHW6 222 aaKnown RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 CCDC188H7C350 402 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 PDHXO00330 501 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 MAGEB2O15479 319 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 NCK2O43639 380 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 GH1P01241 217 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 C4BPAP04003 597 aaKnown RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 SLC19A1P41440 591 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 TNNC1P63316 161 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 GPC5P78333 572 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 CBX1P83916 185 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 GABPB1Q06547 395 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 PLCB4Q15147 1175 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 MTFR1Q15390 333 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 PPP2R5EQ16537 467 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 TBCELQ5QJ74 424 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 C11orf63Q6NUN7 778 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 MAMDC4Q6UXC1 1216 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 CRELD2Q6UXH1 353 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 ARMCX2Q7L311 632 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 DAAM2Q86T65 1068 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 NT5DC3Q86UY8 548 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 BRSK2Q8IWQ3 736 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 FBXO16Q8IX29 292 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 RPUSD2Q8IZ73 545 aaKnown RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 EIF1ADQ8N9N8 165 aaKnown RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 SLC35G2Q8TBE7 412 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.04□□□□□ -1.127e-8■■■■■ 54.2
CXCR4-202ENST00000409817 TRIM11Q96F44 468 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 HES6Q96HZ4 224 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 NAP1L3Q99457 506 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 PARK7Q99497 189 aaKnown RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 TARS2Q9BW92 718 aaKnown RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 SAP130Q9H0E3 1048 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 SEPT11Q9NVA2 429 aaKnown RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 SCHIP1Q9P0W5 487 aaPredicted RBP8.04□□□□□ -1.12
CXCR4-202ENST00000409817 STXBP5LQ9Y2K9 1186 aa8.04□□□□□ -1.12
CXCR4-202ENST00000409817 CCL15-CCL14A0A0B4J2E2 113 aa8.03□□□□□ -1.12
CXCR4-202ENST00000409817 ANKRD33BA6NCL7 494 aa8.03□□□□□ -1.12
CXCR4-202ENST00000409817 ZBTB42B2RXF5 422 aa8.03□□□□□ -1.12
CXCR4-202ENST00000409817 PGRMC1O00264 195 aaKnown RBP8.03□□□□□ -1.12
CXCR4-202ENST00000409817 KCNK3O14649 394 aa8.03□□□□□ -1.12
CXCR4-202ENST00000409817 MSCO60682 206 aa8.03□□□□□ -1.12
CXCR4-202ENST00000409817 SEC31AO94979 1220 aaKnown RBP8.03□□□□□ -1.12
CXCR4-202ENST00000409817 IL2RAP01589 272 aa8.03□□□□□ -1.12
CXCR4-202ENST00000409817 FTLP02792 175 aaPredicted RBP8.03□□□□□ -1.12
CXCR4-202ENST00000409817 CYP11B1P15538 503 aa8.03□□□□□ -1.12
CXCR4-202ENST00000409817 CXCR5P32302 372 aa8.03□□□□□ -1.12
CXCR4-202ENST00000409817 USP8P40818 1118 aa8.03□□□□□ -1.12
CXCR4-202ENST00000409817 MATR3P43243 847 aaKnown RBP eCLIP8.03□□□□□ -1.12
CXCR4-202ENST00000409817 NLRP11P59045 1033 aaKnown RBP8.03□□□□□ -1.12
CXCR4-202ENST00000409817 MCL1Q07820 350 aa8.03□□□□□ -1.12
CXCR4-202ENST00000409817 C2orf54Q08AI8 447 aa8.03□□□□□ -1.12
CXCR4-202ENST00000409817 LAMTOR4Q0VGL1 99 aa8.03□□□□□ -1.12
CXCR4-202ENST00000409817 CCL15Q16663 113 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms