RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 RBM10P98175 930 aaKnown RBP24.2■■□□□ 1.46
PTCD3-203ENST00000409783 TFAMQ00059 246 aaKnown RBP24.2■■□□□ 1.46
PTCD3-203ENST00000409783 SKIV2LQ15477 1246 aaKnown RBP24.2■■□□□ 1.46
PTCD3-203ENST00000409783 EDRF1Q3B7T1 1238 aa24.2■■□□□ 1.46
PTCD3-203ENST00000409783 LMBRD2Q68DH5 695 aaPredicted RBP24.2■■□□□ 1.46
PTCD3-203ENST00000409783 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.2■■□□□ 1.46
PTCD3-203ENST00000409783 C1orf127Q8N9H9 656 aa24.2■■□□□ 1.46
PTCD3-203ENST00000409783 OR5B17Q8NGF7 314 aa24.2■■□□□ 1.46
PTCD3-203ENST00000409783 PIK3R5Q8WYR1 880 aa24.2■■□□□ 1.46
PTCD3-203ENST00000409783 SUSD3Q96L08 255 aa24.2■■□□□ 1.46
PTCD3-203ENST00000409783 KLHL5Q96PQ7 755 aa24.2■■□□□ 1.46
PTCD3-203ENST00000409783 TTPALQ9BTX7 342 aa24.2■■□□□ 1.46
PTCD3-203ENST00000409783 INTS13Q9NVM9 706 aa24.2■■□□□ 1.46
PTCD3-203ENST00000409783 PPP1R3GB7ZBB8 358 aa24.19■■□□□ 1.46
PTCD3-203ENST00000409783 TRAPPC3O43617 180 aa24.19■■□□□ 1.46
PTCD3-203ENST00000409783 NCK2O43639 380 aa24.19■■□□□ 1.46
PTCD3-203ENST00000409783 NR2F2P24468 414 aa24.19■■□□□ 1.46
PTCD3-203ENST00000409783 TKTP29401 623 aaKnown RBP24.19■■□□□ 1.46
PTCD3-203ENST00000409783 KIAA1841Q6NSI8 718 aa24.19■■□□□ 1.46
PTCD3-203ENST00000409783 LNX1Q8TBB1 728 aaPredicted RBP24.19■■□□□ 1.46
PTCD3-203ENST00000409783 RIN2Q8WYP3 895 aaPredicted RBP24.19■■□□□ 1.46
PTCD3-203ENST00000409783 UBE2ZQ9H832 354 aaPredicted RBP24.19■■□□□ 1.46
PTCD3-203ENST00000409783 SSX2IPQ9Y2D8 614 aa24.19■■□□□ 1.46
PTCD3-203ENST00000409783 NUB1Q9Y5A7 615 aa24.19■■□□□ 1.46
PTCD3-203ENST00000409783 PLXNA3P51805 1871 aa24.19■■□□□ 1.46
PTCD3-203ENST00000409783 SPTLC1O15269 473 aa24.18■■□□□ 1.46
PTCD3-203ENST00000409783 CA8P35219 290 aa24.18■■□□□ 1.46
PTCD3-203ENST00000409783 LILRA4P59901 499 aa24.18■■□□□ 1.46
PTCD3-203ENST00000409783 DLX2Q07687 328 aaPredicted RBP24.18■■□□□ 1.46
PTCD3-203ENST00000409783 PRSS55Q6UWB4 352 aaPredicted RBP24.18■■□□□ 1.46
PTCD3-203ENST00000409783 WDR49Q8IV35 697 aa24.18■■□□□ 1.46
PTCD3-203ENST00000409783 ZC3H3Q8IXZ2 948 aaKnown RBP24.18■■□□□ 1.46
PTCD3-203ENST00000409783 TRIML1Q8N9V2 468 aa24.18■■□□□ 1.46
PTCD3-203ENST00000409783 CACTINQ8WUQ7 758 aaKnown RBP24.18■■□□□ 1.46
PTCD3-203ENST00000409783 HLA-CQ95604 372 aa24.18■■□□□ 1.46
PTCD3-203ENST00000409783 POP1Q99575 1024 aaKnown RBP24.18■■□□□ 1.46
PTCD3-203ENST00000409783 CGRRF1Q99675 332 aa24.18■■□□□ 1.46
PTCD3-203ENST00000409783 MTMR12Q9C0I1 747 aa24.18■■□□□ 1.46
PTCD3-203ENST00000409783 NUP62CLQ9H1M0 184 aa24.18■■□□□ 1.46
PTCD3-203ENST00000409783 CLDND1Q9NY35 253 aa24.18■■□□□ 1.46
PTCD3-203ENST00000409783 SIX4Q9UIU6 781 aa24.18■■□□□ 1.46
PTCD3-203ENST00000409783 COG5Q9UP83 839 aa24.18■■□□□ 1.46
PTCD3-203ENST00000409783 M0QZQ0 153 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 MAPK13O15264 365 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 TEX28O15482 410 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 TBX10O75333 385 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 AKAP3O75969 853 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 MCM4P33991 863 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 CLDN10P78369 228 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 ANKRD40Q6AI12 368 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 TMEM184AQ6ZMB5 413 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 CEP57Q86XR8 500 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 PARD3BQ8TEW8 1205 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 SLC22A17Q8WUG5 538 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 ZNF516Q92618 1163 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 CCDC127Q96BQ5 260 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 BORCS6Q96GS4 357 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 DHTKD1Q96HY7 919 aaPredicted RBP24.17■■□□□ 1.46
PTCD3-203ENST00000409783 CLEC1BQ9P126 229 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 FNIP2Q9P278 1114 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 TSC2P49815 1807 aa24.17■■□□□ 1.46
PTCD3-203ENST00000409783 TRIM49BA6NDI0 452 aa24.16■■□□□ 1.46
PTCD3-203ENST00000409783 SYN3O14994 580 aa24.16■■□□□ 1.46
PTCD3-203ENST00000409783 ITGB3P05106 788 aa24.16■■□□□ 1.46
PTCD3-203ENST00000409783 TMEM191BP0C7N4 346 aa24.16■■□□□ 1.46
PTCD3-203ENST00000409783 DLATP10515 647 aaKnown RBP24.16■■□□□ 1.46
PTCD3-203ENST00000409783 CCNE1P24864 410 aa24.16■■□□□ 1.46
PTCD3-203ENST00000409783 MCCD1P59942 119 aaPredicted RBP24.16■■□□□ 1.46
PTCD3-203ENST00000409783 ADAM9Q13443 819 aa24.16■■□□□ 1.46
PTCD3-203ENST00000409783 MRPL58Q14197 206 aaKnown RBP24.16■■□□□ 1.46
PTCD3-203ENST00000409783 CEP135Q66GS9 1140 aa24.16■■□□□ 1.46
PTCD3-203ENST00000409783 EMILIN2Q9BXX0 1053 aa24.16■■□□□ 1.46
PTCD3-203ENST00000409783 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.16■■□□□ 1.46
PTCD3-203ENST00000409783 THEGQ9P2T0 379 aa24.16■■□□□ 1.46
PTCD3-203ENST00000409783 ITGA11Q9UKX5 1188 aa24.16■■□□□ 1.46
PTCD3-203ENST00000409783 HCFC2Q9Y5Z7 792 aa24.16■■□□□ 1.46
PTCD3-203ENST00000409783 FSD2A1L4K1 749 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 LRRIQ3A6PVS8 624 aaPredicted RBP24.15■■□□□ 1.46
PTCD3-203ENST00000409783 RPL17P18621 184 aaKnown RBP24.15■■□□□ 1.46
PTCD3-203ENST00000409783 PAX3P23760 479 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 RPL13P26373 211 aaKnown RBP24.15■■□□□ 1.46
PTCD3-203ENST00000409783 POLR2BP30876 1174 aaKnown RBP24.15■■□□□ 1.46
PTCD3-203ENST00000409783 PPP1R2P41236 205 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 TFF2Q03403 129 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 PSMD5Q16401 504 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 DUOXA2Q1HG44 320 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 C1orf220Q5T0J3 134 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 ANKRD36BP1Q96IX9 119 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 FNBP1Q96RU3 617 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 CLSTN3Q9BQT9 956 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 MTRRQ9UBK8 725 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 PCDHB8Q9UN66 801 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 FRMD4BQ9Y2L6 1034 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 MTCL1Q9Y4B5 1905 aaKnown RBP24.15■■□□□ 1.46
PTCD3-203ENST00000409783 XIRP2A4UGR9 3374 aa24.15■■□□□ 1.46
PTCD3-203ENST00000409783 TULP1O00294 542 aaPredicted RBP24.14■■□□□ 1.45
PTCD3-203ENST00000409783 PSMA7O14818 248 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 ADAM12O43184 909 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 TBC1D4O60343 1298 aa24.14■■□□□ 1.45
PTCD3-203ENST00000409783 CLCN4P51793 760 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms