RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 COPB1P53618 953 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 WNT7BP56706 349 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 DLG4P78352 724 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 UBE3AQ05086 875 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 CETN1Q12798 172 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 CAMK1Q14012 370 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 SKIV2LQ15477 1246 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 VWA3BQ502W6 1294 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 NLRC5Q86WI3 1866 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 EFCAB13Q8IY85 973 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 GSTCDQ8NEC7 633 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 POF1BQ8WVV4 589 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 PPP1R10Q96QC0 940 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 POP1Q99575 1024 aaKnown RBP17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 NDST4Q9H3R1 872 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 TMEM8AQ9HCN3 771 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 TBC1D13Q9NVG8 400 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 TAB2Q9NYJ8 693 aa17.83■□□□□ 0.44
TSPAN4-208ENST00000409531 SPTBN5Q9NRC6 3674 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 CARNS1A5YM72 827 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 PTGESO14684 152 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 PMM2O15305 246 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 P4HA2O15460 535 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 TPM3P06753 285 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 PPM1AP35813 382 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 FMO5P49326 533 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 MXI1P50539 228 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 FANCCQ00597 558 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 PLCB3Q01970 1234 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 RNASELQ05823 741 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 ZBTB6Q15916 424 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 TIGD5Q53EQ6 642 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 GLRA4Q5JXX5 417 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 C1orf220Q5T0J3 134 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 KRT39Q6A163 491 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 ZMAT2Q96NC0 199 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 FAM193BQ96PV7 902 aaPredicted RBP17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 VPS16Q9H269 839 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 NRDE2Q9H7Z3 1164 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 SPG21Q9NZD8 308 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 PUF60Q9UHX1 559 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 R3HCC1Q9Y3T6 440 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 MYO7AQ13402 2215 aa17.82■□□□□ 0.44
TSPAN4-208ENST00000409531 CBFA2T2O43439 604 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 PHACTR2O75167 634 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 POMCP01189 267 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 DNAJB1P25685 340 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 GCLMP48507 274 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 AFF1P51825 1210 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 BCAR1P56945 870 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 KRT17Q04695 432 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 PPP3CAQ08209 521 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 TUSC3Q13454 348 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 BIRC3Q13489 604 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 ZACNQ401N2 412 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 MIIPQ5JXC2 388 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 FKBP15Q5T1M5 1219 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 LMBRD2Q68DH5 695 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 OR5B17Q8NGF7 314 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 MTMR12Q9C0I1 747 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 NSUN3Q9H649 340 aaKnown RBP17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 MMRN2Q9H8L6 949 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 DPP3Q9NY33 737 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 ITGA11Q9UKX5 1188 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 LZTS1Q9Y250 596 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 PTPRJQ12913 1337 aa17.81■□□□□ 0.44
TSPAN4-208ENST00000409531 LGALS16A8MUM7 142 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 C4BPAP04003 597 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 ALDH2P05091 517 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 PBX3P40426 434 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 UBASH3AP57075 661 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 PLCB2Q00722 1185 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 MYL7Q01449 175 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 SARM1Q6SZW1 724 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 C15orf39Q6ZRI6 1047 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 SV2AQ7L0J3 742 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 APTXQ7Z2E3 356 aaKnown RBP17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 TRAPPC11Q7Z392 1133 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 ZNF280BQ86YH2 543 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 SLC39A11Q8N1S5 342 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 ZNF516Q92618 1163 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 UROC1Q96N76 676 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 CXCL16Q9H2A7 254 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 MIOSQ9NXC5 875 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 COG5Q9UP83 839 aa17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 COL4A4P53420 1690 aaPredicted RBP17.8■□□□□ 0.44
TSPAN4-208ENST00000409531 A0A1B0GTH6 734 aa17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 GTPBP10A4D1E9 387 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 ZC3H11AO75152 810 aaKnown RBP eCLIP17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 DDHD2O94830 711 aa17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 GALTP07902 379 aa17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 RPL9P32969 192 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 TRPC3Q13507 836 aa17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 GSE1Q14687 1217 aa17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 TCEAL5Q5H9L2 206 aa17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 TDRD10Q5VZ19 366 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 FBXL13Q8NEE6 735 aa17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 MICAL1Q8TDZ2 1067 aa17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 ATXN2LQ8WWM7 1075 aaKnown RBP17.79■□□□□ 0.44
TSPAN4-208ENST00000409531 DDX27Q96GQ7 796 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms