RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 KIAA1586Q9HCI6 787 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 DCTN4Q9UJW0 460 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 AJAP1Q9UKB5 411 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 hCG_1984214I3L0E3 225 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 VILLO15195 856 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 TYROBPO43914 113 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 MARCKSL1P49006 195 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 MTTPP55157 894 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 PDK3Q15120 406 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 MMEL1Q495T6 779 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 ANKRD20A4Q4UJ75 823 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 PLEKHG4Q58EX7 1191 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 KLHDC10Q6PID8 442 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 DHDDSQ86SQ9 333 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 NLRP10Q86W26 655 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 SLF2Q8IX21 1173 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 ZNF713Q8N859 430 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 FAM172AQ8WUF8 416 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 CD101Q93033 1021 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 SLC35C1Q96A29 364 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 TTC1Q99614 292 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 MRPS26Q9BYN8 205 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 C17orf75Q9HAS0 396 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 SUN2Q9UH99 717 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 ESYT2A0FGR8 921 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 TMEM110-MUSTN1A8MSY1 372 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 FSCN2O14926 492 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 TM9SF1O15321 606 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 SPOPO43791 374 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 CBFA2T3O75081 653 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 CLPTM1O96005 669 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 VCLP18206 1134 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 IVDP26440 423 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 VARSP26640 1264 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 VPS41P49754 854 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 BCAMP50895 628 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 EMP3P54852 163 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 GEMIN4P57678 1058 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 DRAP1Q14919 205 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 TBCCQ15814 346 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 SBK1Q52WX2 424 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 C1orf146Q5VVC0 180 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 KYAT3Q6YP21 454 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 CCDC89Q8N998 374 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 VTI1AQ96AJ9 217 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 NAP1L4Q99733 375 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 LBHD1Q9BQE6 289 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 FGFBP2Q9BYJ0 223 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 VPS11Q9H270 941 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 Q9H521 79 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 USP29Q9HBJ7 922 aa6.17□□□□□ -1.42
R3HDM1-202ENST00000409478 NPHP3-ACAD11A0A0J9YXS1 232 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 TCRBV7S2A1N4TA0A589 114 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 CCDC160A6NGH7 325 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 ERVV-2B6SEH9 535 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 CYTH3O43739 400 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 KRT18P05783 430 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 DLATP10515 647 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 CHRNB2P17787 502 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 CYP11B2P19099 503 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 GALK1P51570 392 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 GSTM4Q03013 218 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 KIF22Q14807 665 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 SLC1A5Q15758 541 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 PDCD4Q53EL6 469 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 GJB7Q6PEY0 223 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 BORAQ6PGQ7 559 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 RAPH1Q70E73 1250 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 RFWD2Q8NHY2 731 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 SNRNP27Q8WVK2 155 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 OXNAD1Q96HP4 312 aaPredicted RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 ABHD8Q96I13 439 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 DNAJC1Q96KC8 554 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 AGAP3Q96P47 875 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 PANX3Q96QZ0 392 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 POP1Q99575 1024 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 TMEM120AQ9BXJ8 343 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 CRNKL1Q9BZJ0 848 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 MANSC1Q9H8J5 431 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 DNAJC17Q9NVM6 304 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 TUBA8Q9NY65 449 aaPredicted RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 SLC24A2Q9UI40 661 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 DNAJC12Q9UKB3 198 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 POLIQ9UNA4 740 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 TELO2Q9Y4R8 837 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 NUMBLQ9Y6R0 609 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 TMEM247A6NEH6 219 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 B2RBV5 119 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 POTECB2RU33 542 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 E9PBE3 544 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 CSDE1O75534 798 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 PDE5AO76074 875 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 CAMTA2O94983 1202 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 OR6B1O95007 311 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 IL1BP01584 269 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 ATP5BP06576 529 aaKnown RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 PLA2G4BP0C869 781 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 ALOX15P16050 662 aaPredicted RBP6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 MAGEA4P43358 317 aa6.16□□□□□ -1.42
R3HDM1-202ENST00000409478 TBL3Q12788 808 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms