RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 MCF2P10911 925 aa22.12■■□□□ 1.13
USP39-203ENST00000409470 TAF1CQ15572 869 aaPredicted RBP22.12■■□□□ 1.13
USP39-203ENST00000409470 AMHR2Q16671 573 aa22.12■■□□□ 1.13
USP39-203ENST00000409470 ZNF699Q32M78 642 aa22.12■■□□□ 1.13
USP39-203ENST00000409470 PRAMEF19Q5SWL8 479 aa22.12■■□□□ 1.13
USP39-203ENST00000409470 RASAL3Q86YV0 1011 aa22.12■■□□□ 1.13
USP39-203ENST00000409470 WNT8AQ9H1J5 351 aa22.12■■□□□ 1.13
USP39-203ENST00000409470 VIPAS39Q9H9C1 493 aa22.12■■□□□ 1.13
USP39-203ENST00000409470 ZSWIM8A7E2V4 1837 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 DYNC1LI2O43237 492 aaPredicted RBP22.11■■□□□ 1.13
USP39-203ENST00000409470 STAG3L1P0CL83 205 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 ITGA4P13612 1032 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 CD58P19256 250 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 SSTR3P32745 418 aaPredicted RBP22.11■■□□□ 1.13
USP39-203ENST00000409470 EPHB4P54760 987 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 CENPCQ03188 943 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 MAP2K5Q13163 448 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 MORN1Q5T089 497 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 SND1Q7KZF4 910 aaKnown RBP eCLIP22.11■■□□□ 1.134e-6■■□□□ 12.7
USP39-203ENST00000409470 UBE2Q2Q8WVN8 375 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 IFT81Q8WYA0 676 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 KRT35Q92764 455 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 ZBTB9Q96C00 473 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 DDX47Q9H0S4 455 aaKnown RBP22.11■■□□□ 1.13
USP39-203ENST00000409470 PDZD7Q9H5P4 517 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 ESYT3A0FGR9 886 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 ZSCAN5CA6NGD5 496 aaPredicted RBP22.11■■□□□ 1.13
USP39-203ENST00000409470 POLR3GO15318 223 aaPredicted RBP22.11■■□□□ 1.13
USP39-203ENST00000409470 SART1O43290 800 aaKnown RBP22.11■■□□□ 1.13
USP39-203ENST00000409470 CFHP08603 1231 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 CLUL1Q15846 466 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 GLIPR1L2Q4G1C9 344 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 MARCH8Q5T0T0 291 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 AVENQ9NQS1 362 aaPredicted RBP22.11■■□□□ 1.13
USP39-203ENST00000409470 ANAPC7Q9UJX3 599 aa22.11■■□□□ 1.13
USP39-203ENST00000409470 MANSC4A6NHS7 340 aaPredicted RBP22.1■■□□□ 1.13
USP39-203ENST00000409470 ERLIN2O94905 339 aa22.1■■□□□ 1.13
USP39-203ENST00000409470 ITGBL1O95965 494 aaPredicted RBP22.1■■□□□ 1.13
USP39-203ENST00000409470 KRT19P08727 400 aa22.1■■□□□ 1.13
USP39-203ENST00000409470 ARF4P18085 180 aaPredicted RBP22.1■■□□□ 1.13
USP39-203ENST00000409470 RRM1P23921 792 aa22.1■■□□□ 1.13
USP39-203ENST00000409470 PHLDB2Q86SQ0 1253 aa22.1■■□□□ 1.13
USP39-203ENST00000409470 UBR7Q8N806 425 aa22.1■■□□□ 1.13
USP39-203ENST00000409470 CISHQ9NSE2 258 aa22.1■■□□□ 1.13
USP39-203ENST00000409470 ZNF236Q9UL36 1845 aa22.1■■□□□ 1.13
USP39-203ENST00000409470 MARCKSL1P49006 195 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 CARSP49589 748 aaKnown RBP22.09■■□□□ 1.13
USP39-203ENST00000409470 ZNF132P52740 706 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 NOMO3P69849 1222 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 GABPB1Q06547 395 aaPredicted RBP22.09■■□□□ 1.13
USP39-203ENST00000409470 PAK2Q13177 524 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 LIN9Q5TKA1 542 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 EMBQ6PCB8 327 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 SCARA5Q6ZMJ2 495 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 CCDC102AQ96A19 550 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 SETD4Q9NVD3 440 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 HPCAL4Q9UM19 191 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 KAT6AQ92794 2004 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 GOLGA6L10A0A0M3HER8 536 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 LACTBL1A8MY62 500 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 H3BQF6 201 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 C2CD6Q53TS8 623 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 MON1BQ7L1V2 547 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 ADAT2Q7Z6V5 191 aaKnown RBP22.09■■□□□ 1.13
USP39-203ENST00000409470 KIAA0319LQ8IZA0 1049 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 ZNF606Q8WXB4 792 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 CD101Q93033 1021 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 C11orf70Q9BRQ4 267 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 SLITRK6Q9H5Y7 841 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 PRDM10Q9NQV6 1147 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 NFU1Q9UMS0 254 aa22.09■■□□□ 1.13
USP39-203ENST00000409470 CCDC66A2RUB6 948 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 RRN3P2A6NIE6 340 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 NFICP08651 508 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 WEE2P0C1S8 567 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 ZNF394Q53GI3 561 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 HSP90B2PQ58FF3 399 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 SEL1L2Q5TEA6 688 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 CPNE8Q86YQ8 564 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 CCDC26Q8TAB7 109 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 CASKIN2Q8WXE0 1202 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 XYLT2Q9H1B5 865 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 ADAM22Q9P0K1 906 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 NXF1Q9UBU9 619 aaKnown RBP22.08■■□□□ 1.13
USP39-203ENST00000409470 ANK1P16157 1881 aa22.08■■□□□ 1.13
USP39-203ENST00000409470 CTNNA1P35221 906 aaKnown RBP22.07■■□□□ 1.12
USP39-203ENST00000409470 PEX5P50542 639 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 KYAT1Q16773 422 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 JADE1Q6IE81 842 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 PPP1R2P3Q6NXS1 205 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 MAATS1Q7Z4T9 603 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 ZNF410Q86VK4 478 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 FLRT1Q9NZU1 646 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 AMACRQ9UHK6 382 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 A6NJR5 290 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 TSPAN1O60635 241 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 CTNNA2P26232 953 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 YWHAEP62258 255 aaKnown RBP22.07■■□□□ 1.12
USP39-203ENST00000409470 CHADLQ6NUI6 762 aa22.07■■□□□ 1.12
USP39-203ENST00000409470 AADACL2Q6P093 401 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms