RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 CGRRF1Q99675 332 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 FDXACB1Q9BRP7 624 aaPredicted RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 TINF2Q9BSI4 451 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 FUT8Q9BYC5 575 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 CCDC113Q9H0I3 377 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ISCUQ9H1K1 167 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 C2orf40Q9H1Z8 148 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 TUT1Q9H6E5 874 aaKnown RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 DMGDHQ9UI17 866 aaKnown RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 COG5Q9UP83 839 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 AKT3Q9Y243 479 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ARID2Q68CP9 1835 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 CNTNAP2Q9UHC6 1331 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ACKR2O00590 384 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ASAP2O43150 1006 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ZC3H11AO75152 810 aaKnown RBP eCLIP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 PPFIA4O75335 1185 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 C22orf31O95567 290 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ADH1BP00325 375 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 VTNP04004 478 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 GZMAP12544 262 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 SMPD1P17405 629 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ZNF157P51786 506 aaPredicted RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 PTENP60484 403 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 TFAMQ00059 246 aaKnown RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 CDR2Q01850 454 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ENPEPQ07075 957 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 NCOA4Q13772 614 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ELOAQ14241 798 aaKnown RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 GRB14Q14449 540 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ZNF568Q3ZCX4 644 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ZNF484Q5JVG2 852 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 ATF7IP2Q5U623 682 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 WDR93Q6P2C0 686 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 SLFN11Q7Z7L1 901 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 RHOT2Q8IXI1 618 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 OR6J1Q8NGC5 347 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 PPTC7Q8NI37 304 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 PPP1R13LQ8WUF5 828 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 HNRNPLLQ8WVV9 542 aaKnown RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 GDAP1L1Q96MZ0 367 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 SCLT1Q96NL6 688 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 SELENOOQ9BVL4 669 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 KATNBL1Q9H079 304 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 APOBEC3GQ9HC16 384 aaKnown RBP4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 NUB1Q9Y5A7 615 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 PCDHB4Q9Y5E5 795 aa4.27□□□□□ -1.73
LRRTM4-201ENST00000409088 UMODL1Q5DID0 1318 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 RBM47A0AV96 593 aaKnown RBP4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 DYNC1LI2O43237 492 aaPredicted RBP4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 ATP8B1O43520 1251 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 IQCF3P0C7M6 154 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 TMOD1P28289 359 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 MAPK4P31152 587 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 PLA2G4AP47712 749 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 NOP14P78316 857 aaKnown RBP4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 ITIH3Q06033 890 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 MCL1Q07820 350 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 CUL2Q13617 745 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 MESDQ14696 234 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 DUOXA2Q1HG44 320 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 C8orf74Q6P047 294 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 TMEM270Q6UE05 265 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 MPZL3Q6UWV2 235 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 ZNF572Q7Z3I7 529 aaPredicted RBP4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 PHLDB2Q86SQ0 1253 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 KLHL7Q8IXQ5 586 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 GSPT2Q8IYD1 628 aaKnown RBP4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 USP38Q8NB14 1042 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 DDX1Q92499 740 aaKnown RBP4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 PBKQ96KB5 322 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 KRT12Q99456 494 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 C16orf70Q9BSU1 422 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 IMPG2Q9BZV3 1241 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 MTMR12Q9C0I1 747 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 ABHD16BQ9H3Z7 469 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 FZD8Q9H461 694 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 L1RE1Q9UN81 338 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 GINS2Q9Y248 185 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 STXBP5LQ9Y2K9 1186 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 ALG6Q9Y672 507 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 NCANO14594 1321 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 ATP8B3O60423 1300 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 TARSL2A2RTX5 802 aaKnown RBP4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 IGF2BP3O00425 579 aaKnown RBP eCLIP4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 MAGEB2O15479 319 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 FAM189A1O60320 539 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 CLTAP09496 248 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 TMEM191BP0C7N4 346 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 MYBL2P10244 700 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 MCM3P25205 808 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 TNNT3P45378 269 aaPredicted RBP4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 PHKA2P46019 1235 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 TNFAIP2Q03169 654 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 MBTD1Q05BQ5 628 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 PPFIA1Q13136 1202 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 TRPC3Q13507 836 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 TAF1CQ15572 869 aaPredicted RBP4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 DUSP28Q4G0W2 176 aa4.26□□□□□ -1.73
LRRTM4-201ENST00000409088 C2CD6Q53TS8 623 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms