RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 KIF12Q96FN5 646 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 NGRNQ9NPE2 291 aaKnown RBP13.33□□□□□ -0.28
ATG9A-203ENST00000409033 MIF4GDA9UHW6 222 aaKnown RBP13.33□□□□□ -0.28
ATG9A-203ENST00000409033 P4HA2O15460 535 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 RGS16O15492 202 aaPredicted RBP13.33□□□□□ -0.28
ATG9A-203ENST00000409033 SLC25A27O95847 323 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 MYL3P08590 195 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 RALAP11233 206 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 ATF2P15336 505 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 PSMA2P25787 234 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 SCARA3Q6AZY7 606 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 ZNF662Q6ZS27 426 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 TMEM192Q8IY95 271 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 WHAMMQ8TF30 809 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 MIS12Q9H081 205 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 C10orf88Q9H8K7 445 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 ERAP1Q9NZ08 941 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 GTF3C4Q9UKN8 822 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 ARFGEF1Q9Y6D6 1849 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 GOLGA8KD6RF30 607 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 SGK1O00141 431 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 CTSHP09668 335 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 CYP2C19P33261 490 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 PSMC1P62191 440 aaKnown RBP13.33□□□□□ -0.28
ATG9A-203ENST00000409033 KRT17Q04695 432 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 IER5Q5VY09 327 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 TAS1R3Q7RTX0 852 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 SAMD3Q8N6K7 520 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 AENQ8WTP8 325 aaKnown RBP13.33□□□□□ -0.28
ATG9A-203ENST00000409033 CISHQ9NSE2 258 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 ARHGAP28Q9P2N2 729 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 PPP2R3BQ9Y5P8 575 aa13.33□□□□□ -0.28
ATG9A-203ENST00000409033 EBAG9O00559 213 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 POLR2BP30876 1174 aaKnown RBP13.32□□□□□ -0.28
ATG9A-203ENST00000409033 HSD17B3P37058 310 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 RFC5P40937 340 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 EFNA5P52803 228 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 MAGOHP61326 146 aaKnown RBP13.32□□□□□ -0.28
ATG9A-203ENST00000409033 MAP3K10Q02779 954 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 CPLX4Q7Z7G2 160 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 TMC2Q8TDI7 906 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 GPR88Q9GZN0 384 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 NEUROG2Q9H2A3 272 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 FAM114A2Q9NRY5 505 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 ZNF112Q9UJU3 913 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 POLR2AP24928 1970 aaKnown RBP13.32□□□□□ -0.28
ATG9A-203ENST00000409033 O00370 1275 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 OGTO15294 1046 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 VIMP08670 466 aaKnown RBP13.32□□□□□ -0.28
ATG9A-203ENST00000409033 CLTAP09496 248 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 CHRNB2P17787 502 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 HUNKP57058 714 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 IRX5P78411 483 aaPredicted RBP13.32□□□□□ -0.28
ATG9A-203ENST00000409033 MXD4Q14582 209 aaPredicted RBP13.32□□□□□ -0.28
ATG9A-203ENST00000409033 ZC3H3Q8IXZ2 948 aaKnown RBP13.32□□□□□ -0.28
ATG9A-203ENST00000409033 TMEM35BQ8NCS4 154 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 OR6B3Q8NGW1 331 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 SNX9Q9Y5X1 595 aa13.32□□□□□ -0.28
ATG9A-203ENST00000409033 SYF2O95926 243 aaKnown RBP13.31□□□□□ -0.28
ATG9A-203ENST00000409033 SEC24CP53992 1094 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 FAM149B1Q96BN6 582 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 PWWP2AQ96N64 755 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 CARD9Q9H257 536 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 VPS37BQ9H9H4 285 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 APOBEC3GQ9HC16 384 aaKnown RBP13.31□□□□□ -0.28
ATG9A-203ENST00000409033 MRPL47Q9HD33 250 aaKnown RBP13.31□□□□□ -0.28
ATG9A-203ENST00000409033 LTBP1Q14766 1721 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 POC1B-GALNT4F8VUJ3 575 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 PDGFRBP09619 1106 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 RPL7AP62424 266 aaKnown RBP13.31□□□□□ -0.28
ATG9A-203ENST00000409033 CUL1Q13616 776 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 C2orf69Q8N8R5 385 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 TTC16Q8NEE8 873 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 LMO3Q8TAP4 145 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 C12orf42Q96LP6 360 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 OSMRQ99650 979 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 SIPA1L1O43166 1804 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 ASB14A6NK59 587 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 MYBPC2Q14324 1141 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 CLEC16AQ2KHT3 1053 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 ZACNQ401N2 412 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 PPP6R3Q5H9R7 873 aaPredicted RBP13.31□□□□□ -0.28
ATG9A-203ENST00000409033 CELF3Q5SZQ8 465 aaKnown RBP13.31□□□□□ -0.28
ATG9A-203ENST00000409033 BSPRYQ5W0U4 402 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 SLC13A5Q86YT5 568 aaPredicted RBP13.31□□□□□ -0.28
ATG9A-203ENST00000409033 ZNF606Q8WXB4 792 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 HVCN1Q96D96 273 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 C9orf72Q96LT7 481 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 CGRRF1Q99675 332 aa13.31□□□□□ -0.28
ATG9A-203ENST00000409033 JPH2Q9BR39 696 aaPredicted RBP13.31□□□□□ -0.28
ATG9A-203ENST00000409033 MAK16Q9BXY0 300 aaKnown RBP13.31□□□□□ -0.28
ATG9A-203ENST00000409033 DHX33Q9H6R0 707 aaKnown RBP13.31□□□□□ -0.28
ATG9A-203ENST00000409033 H3BRB1 525 aa13.3□□□□□ -0.28
ATG9A-203ENST00000409033 NFICP08651 508 aa13.3□□□□□ -0.28
ATG9A-203ENST00000409033 PSMD6Q15008 389 aa13.3□□□□□ -0.28
ATG9A-203ENST00000409033 SEPT7Q16181 437 aaKnown RBP13.3□□□□□ -0.28
ATG9A-203ENST00000409033 RUFY4Q6ZNE9 571 aa13.3□□□□□ -0.28
ATG9A-203ENST00000409033 KIAA0319LQ8IZA0 1049 aa13.3□□□□□ -0.28
ATG9A-203ENST00000409033 ACTRT1Q8TDG2 376 aa13.3□□□□□ -0.28
ATG9A-203ENST00000409033 GPR20Q99678 358 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms