RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SACM1LQ9NTJ5 587 aa5.7□□□□□ -1.5
HMGB3P18-201ENST00000406327 CPNE7Q9UBL6 633 aa5.7□□□□□ -1.5
HMGB3P18-201ENST00000406327 CARMIL2Q6F5E8 1435 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 SH3D21A4FU49 640 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 TRIM43BA6NCK2 446 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 B5MCH6 92 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 HNRNPDLO14979 420 aaKnown RBP5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 GRM6O15303 877 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 PJA2O43164 708 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 SKAP2O75563 359 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 CHKAP35790 457 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 IL6STP40189 918 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 ALDH1A3P47895 512 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 POU6F2P78424 691 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 ATP2C1P98194 919 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 SLC13A2Q13183 592 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 PMS2P11Q13670 270 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 ZNF124Q15973 351 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 CCDC38Q502W7 563 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 ALFQ53S48 1182 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 LMBRD2Q68DH5 695 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 SKAP1Q86WV1 359 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 PDSS2Q86YH6 399 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 TMEFF1Q8IYR6 380 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 RNF152Q8N8N0 203 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 REPS2Q8NFH8 660 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 ATXN2LQ8WWM7 1075 aaKnown RBP5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 STON2Q8WXE9 905 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 TRIM43Q96BQ3 446 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 LCORQ96JN0 433 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 MYLK2Q9H1R3 596 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 NCDNQ9UBB6 729 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 CDC23Q9UJX2 597 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 RUVBL1Q9Y265 456 aaKnown RBP5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 PCDHGB2Q9Y5G2 931 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 DGKBQ9Y6T7 804 aa5.69□□□□□ -1.5
HMGB3P18-201ENST00000406327 BAZ1AQ9NRL2 1556 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 BTN3A1O00481 513 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 FFAR2O15552 330 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 PIP5K1CO60331 668 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 TLR5O60602 858 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 EIF5BO60841 1220 aaKnown RBP5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 WDHD1O75717 1129 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 MATN4O95460 622 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 AHSGP02765 367 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 AMHP03971 560 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 ANXA2P07355 339 aaKnown RBP5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 ZNF888P0CJ79 500 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 RARBP10826 455 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 HSD3B1P14060 373 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 FPR1P21462 350 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 CASRP41180 1078 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 HGFACQ04756 655 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 EXOSC9Q06265 439 aaKnown RBP5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 KIF22Q14807 665 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 ZDHHC14Q8IZN3 488 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 OR14K1Q8NGZ2 314 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 ZNF566Q969W8 418 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 EVI5LQ96CN4 794 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 SPATA25Q9BR10 227 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 MRI1Q9BV20 369 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 C1orf43Q9BWL3 253 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 TTLL2Q9BWV7 592 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 KRTAP17-1Q9BYP8 105 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 EPC1Q9H2F5 836 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 IL23AQ9NPF7 189 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 SLAMF7Q9NQ25 335 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 CASS4Q9NQ75 786 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 JKAMPQ9P055 326 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 MYO1AQ9UBC5 1043 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 RGS17Q9UGC6 210 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 ZDHHC9Q9Y397 364 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 NR2E1Q9Y466 385 aa5.68□□□□□ -1.5
HMGB3P18-201ENST00000406327 ATRNL1Q5VV63 1379 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 MBD3L4A6NDZ8 208 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 MBD3L3A6NE82 208 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 MYO1CO00159 1063 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 SLC26A4O43511 780 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 SLC43A1O75387 559 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 HAUS5O94927 633 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 CHEK2O96017 543 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 FGFR2P21802 821 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 EEF1GP26641 437 aaKnown RBP5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 KLRC1P26715 233 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 HSPA7P48741 367 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 PUM3Q15397 648 aaKnown RBP5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 ELF2Q15723 593 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 PKN1Q16512 942 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 ZNF385BQ569K4 471 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 CCDC70Q6NSX1 233 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 CCDC174Q6PII3 467 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 ZNF365Q70YC5 407 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 TXLNBQ8N3L3 684 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 DCBLD1Q8N8Z6 715 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 TXNDC5Q8NBS9 432 aaKnown RBP5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 FBXO18Q8NFZ0 1043 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms