RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 PUM1Q14671 1186 aaKnown RBP eCLIP11.45□□□□□ -0.58
RPAIN-204ENST00000405578 CT47A1Q5JQC4 288 aaPredicted RBP11.45□□□□□ -0.58
RPAIN-204ENST00000405578 KLHL10Q6JEL2 608 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 AGMOQ6ZNB7 445 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 RBM43Q6ZSC3 357 aaKnown RBP11.45□□□□□ -0.58
RPAIN-204ENST00000405578 USP37Q86T82 979 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 SLC9A9Q8IVB4 645 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 CD302Q8IX05 232 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 C12orf56Q8IXR9 622 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 CCDC105Q8IYK2 499 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 HELQQ8TDG4 1101 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 FAM193BQ96PV7 902 aaPredicted RBP11.45□□□□□ -0.58
RPAIN-204ENST00000405578 TSPAN18Q96SJ8 248 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 CBWD1Q9BRT8 395 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 FAM213AQ9BRX8 229 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 KCTD10Q9H3F6 313 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 PCIF1Q9H4Z3 704 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 AAASQ9NRG9 546 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 SLC38A7Q9NVC3 462 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 ANO10Q9NW15 660 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 HSPBP1Q9NZL4 362 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 TRAF3IP3Q9Y228 551 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 ARL5CA6NH57 179 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 TISP43B9A030 160 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 CETN3O15182 167 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 CLIC2O15247 247 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 XPOTO43592 962 aaKnown RBP11.44□□□□□ -0.58
RPAIN-204ENST00000405578 PI15O43692 258 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 OFD1O75665 1012 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 IL18RAPO95256 599 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 FGFR1OPO95684 399 aaKnown RBP11.44□□□□□ -0.58
RPAIN-204ENST00000405578 LMNAP02545 664 aaKnown RBP11.44□□□□□ -0.58
RPAIN-204ENST00000405578 NR3C1P04150 777 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 AOC1P19801 751 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 NR2F2P24468 414 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 CCNE1P24864 410 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 ACOT2P49753 483 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 PAK1Q13153 545 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 SURF1Q15526 300 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 STX1AQ16623 288 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 NFIL3Q16649 462 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 EDRF1Q3B7T1 1238 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 CLLU1OSQ5K130 101 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 CENPPQ6IPU0 288 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 PDE12Q6L8Q7 609 aaKnown RBP11.44□□□□□ -0.58
RPAIN-204ENST00000405578 CES5AQ6NT32 575 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 CEP120Q8N960 986 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 TDRD5Q8NAT2 981 aaKnown RBP11.44□□□□□ -0.58
RPAIN-204ENST00000405578 DTWD2Q8NBA8 298 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 COLGALT1Q8NBJ5 622 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 TMEM174Q8WUU8 243 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 NELFBQ8WX92 580 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 FAM212AQ96EL1 285 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 SAAL1Q96ER3 474 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 NECTIN4Q96NY8 510 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 GAD1Q99259 594 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 HINFPQ9BQA5 517 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 NAT10Q9H0A0 1025 aaKnown RBP11.44□□□□□ -0.58
RPAIN-204ENST00000405578 ENTPD7Q9NQZ7 604 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 RBAKQ9NYW8 714 aaPredicted RBP11.44□□□□□ -0.58
RPAIN-204ENST00000405578 TMEM63CQ9P1W3 806 aa11.44□□□□□ -0.58
RPAIN-204ENST00000405578 CPSF3Q9UKF6 684 aaKnown RBP11.44□□□□□ -0.58
RPAIN-204ENST00000405578 HIDE1A8MVS5 230 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 PPP1R3GB7ZBB8 358 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 INPPL1O15357 1258 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 ABCB7O75027 752 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 THP07101 528 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 WEE2P0C1S8 567 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 CCDC192P0DO97 292 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 BMP6P22004 513 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 ALDH7A1P49419 539 aaKnown RBP11.43□□□□□ -0.58
RPAIN-204ENST00000405578 FKBP3Q00688 224 aaKnown RBP11.43□□□□□ -0.58
RPAIN-204ENST00000405578 GRIK3Q13003 919 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 ADAM9Q13443 819 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 SNRNP35Q16560 246 aaKnown RBP11.43□□□□□ -0.58
RPAIN-204ENST00000405578 TPD52L1Q16890 204 aaPredicted RBP11.43□□□□□ -0.58
RPAIN-204ENST00000405578 SEZ6Q53EL9 994 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 FOXR2Q6PJQ5 311 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 CASP10Q92851 521 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 CASD1Q96PB1 797 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 TCF25Q9BQ70 676 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 HAPLN2Q9GZV7 340 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 IKZF4Q9H2S9 585 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 ASB7Q9H672 318 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 KLK14Q9P0G3 267 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 LIMD1Q9UGP4 676 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 RWDD2AQ9UIY3 292 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 R4GN57 208 aa11.43□□□□□ -0.58
RPAIN-204ENST00000405578 GOLGA8IPA6NC78 632 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 GOLGA8JA6NMD2 632 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 MEIS3P2A8K0S8 358 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 FAM189A1O60320 539 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 POMCP01189 267 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 CXCL8P10145 99 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 EPB41P11171 864 aaKnown RBP11.42□□□□□ -0.58
RPAIN-204ENST00000405578 KRT13P13646 458 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 NPR3P17342 541 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 LAG3P18627 525 aa11.42□□□□□ -0.58
RPAIN-204ENST00000405578 ERCC5P28715 1186 aaPredicted RBP11.42□□□□□ -0.58
RPAIN-204ENST00000405578 PSMC2P35998 433 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms