RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 SPATA21Q7Z572 469 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 CEP57Q86XR8 500 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 RTKN2Q8IZC4 609 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 ZNF516Q92618 1163 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 KCNN1Q92952 543 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 OSBPL8Q9BZF1 889 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 NOD2Q9HC29 1040 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 NKIRAS1Q9NYS0 192 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 GABBR1Q9UBS5 961 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 MCM8Q9UJA3 840 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 R3HDM2Q9Y2K5 976 aaKnown RBP11.41□□□□□ -0.58
CLIP4-204ENST00000404424 CD2APQ9Y5K6 639 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 A0A1B0GUA9 196 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 UBOX5O94941 541 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 STBD1O95210 358 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 C4BPAP04003 597 aaKnown RBP11.41□□□□□ -0.58
CLIP4-204ENST00000404424 PSAPP07602 524 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 CREB1P16220 341 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 STX2P32856 288 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 STRN3Q13033 797 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 NR1H3Q13133 447 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 VSIG10LQ86VR7 867 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 ABRAQ8N0Z2 381 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 ANKRD35Q8N283 1001 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 GIMAP7Q8NHV1 300 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 ATP6V0A4Q9HBG4 840 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 ADAM22Q9P0K1 906 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 NAALADL1Q9UQQ1 740 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 STYXL1Q9Y6J8 313 aa11.41□□□□□ -0.58
CLIP4-204ENST00000404424 ZNF862O60290 1169 aa11.4□□□□□ -0.58
CLIP4-204ENST00000404424 HLA-DRAP01903 254 aa11.4□□□□□ -0.58
CLIP4-204ENST00000404424 NQO1P15559 274 aaKnown RBP11.4□□□□□ -0.58
CLIP4-204ENST00000404424 TNNI1P19237 187 aa11.4□□□□□ -0.58
CLIP4-204ENST00000404424 C1QBPQ07021 282 aaKnown RBP11.4□□□□□ -0.58
CLIP4-204ENST00000404424 BNIP1Q12981 228 aa11.4□□□□□ -0.58
CLIP4-204ENST00000404424 IZUMO3Q5VZ72 239 aa11.4□□□□□ -0.58
CLIP4-204ENST00000404424 PLEKHA7Q6IQ23 1121 aa11.4□□□□□ -0.58
CLIP4-204ENST00000404424 PHF13Q86YI8 300 aaPredicted RBP11.4□□□□□ -0.58
CLIP4-204ENST00000404424 ANKRD42Q8N9B4 389 aa11.4□□□□□ -0.58
CLIP4-204ENST00000404424 ZBED3Q96IU2 234 aaPredicted RBP11.4□□□□□ -0.58
CLIP4-204ENST00000404424 RXFP1Q9HBX9 757 aa11.4□□□□□ -0.58
CLIP4-204ENST00000404424 UBN1Q9NPG3 1134 aa11.4□□□□□ -0.58
CLIP4-204ENST00000404424 CTNNAL1Q9UBT7 734 aa11.4□□□□□ -0.58
CLIP4-204ENST00000404424 PRKAG3Q9UGI9 489 aa11.4□□□□□ -0.58
CLIP4-204ENST00000404424 ZBTB12Q9Y330 459 aaPredicted RBP11.4□□□□□ -0.58
CLIP4-204ENST00000404424 NFASCO94856 1347 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 NDC80O14777 642 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 ACO1P21399 889 aaKnown RBP11.4□□□□□ -0.59
CLIP4-204ENST00000404424 TBXAS1P24557 533 aaPredicted RBP11.4□□□□□ -0.59
CLIP4-204ENST00000404424 KLRC2P26717 231 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 NF2P35240 595 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 PIK3CAP42336 1068 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 LIG4P49917 911 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 COPS2P61201 443 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 NCALDP61601 193 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 NOMO3P69849 1222 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 MKRN4PQ13434 485 aaPredicted RBP11.4□□□□□ -0.59
CLIP4-204ENST00000404424 MAMLD1Q13495 774 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 ACVR2BQ13705 512 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 RNF43Q68DV7 783 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 DRICH1Q6PGQ1 229 aaPredicted RBP11.4□□□□□ -0.59
CLIP4-204ENST00000404424 TAS1R3Q7RTX0 852 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 TBC1D1Q86TI0 1168 aaPredicted RBP11.4□□□□□ -0.59
CLIP4-204ENST00000404424 ZCCHC9Q8N567 271 aaKnown RBP11.4□□□□□ -0.59
CLIP4-204ENST00000404424 ELMO3Q96BJ8 720 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 CFAP57Q96MR6 1250 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 TTC25Q96NG3 672 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 TGS1Q96RS0 853 aaKnown RBP11.4□□□□□ -0.59
CLIP4-204ENST00000404424 HEMGNQ9BXL5 484 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 VPS33BQ9H267 617 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 XPNPEP1Q9NQW7 623 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 DNAJC17Q9NVM6 304 aaKnown RBP11.4□□□□□ -0.59
CLIP4-204ENST00000404424 EURLQ9NYK6 297 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 KLHL14Q9P2G3 628 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 BAIAP2L1Q9UHR4 511 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 AGAP1Q9UPQ3 857 aa11.4□□□□□ -0.59
CLIP4-204ENST00000404424 EP400Q96L91 3159 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 LDHAP00338 332 aaKnown RBP11.39□□□□□ -0.59
CLIP4-204ENST00000404424 CALCAP01258 141 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 NR3C2P08235 984 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 GNA15P30679 374 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 SKIV2L2P42285 1042 aaKnown RBP11.39□□□□□ -0.59
CLIP4-204ENST00000404424 SOX10P56693 466 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 IL9RQ01113 521 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 CCDC15Q0P6D6 951 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 SF3A3Q12874 501 aaKnown RBP eCLIP11.39□□□□□ -0.59
CLIP4-204ENST00000404424 CUL2Q13617 745 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 MTFR1Q15390 333 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 TDRD10Q5VZ19 366 aaKnown RBP11.39□□□□□ -0.59
CLIP4-204ENST00000404424 RCOR2Q8IZ40 523 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 CYP4X1Q8N118 509 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 TCP11Q8WWU5 503 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 RBM41Q96IZ5 413 aaKnown RBP11.39□□□□□ -0.59
CLIP4-204ENST00000404424 CDHR1Q96JP9 859 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 C11orf70Q9BRQ4 267 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 ECT2Q9H8V3 914 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 CYP26B1Q9NR63 512 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 PARVAQ9NVD7 372 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 CNTN6Q9UQ52 1028 aa11.39□□□□□ -0.59
CLIP4-204ENST00000404424 GSTTP1A0A1W2PQM5 241 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms