RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 OR52N2Q8NGI0 321 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 ATXN2LQ8WWM7 1075 aaKnown RBP6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 SARGQ9BW04 601 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 BHMT2Q9H2M3 363 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 ZMAT3Q9HA38 289 aaKnown RBP6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 ATP6V0A4Q9HBG4 840 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 SLAMF7Q9NQ25 335 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 CPA4Q9UI42 421 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 ST6GALNAC2Q9UJ37 374 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 L1RE1Q9UN81 338 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 PCDHGB6Q9Y5F9 930 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 MAGI3Q5TCQ9 1506 aa6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 TROQ12816 1431 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 TTBK1Q5TCY1 1321 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P19-201ENST00000403971 CAPN8A6NHC0 703 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 APAF1O14727 1248 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 MFAP3LO75121 409 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 ARIH2O95376 493 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 MAP4K4O95819 1239 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 ACO1P21399 889 aaKnown RBP6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 FGL2Q14314 439 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 COBLL1Q53SF7 1204 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 PPP4R4Q6NUP7 873 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 EFCAB12Q6NXP0 572 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 Q6ZRM9 215 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 SRGAP1Q7Z6B7 1085 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 SYT12Q8IV01 421 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 MIEF2Q96C03 454 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 PHACTR3Q96KR7 559 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 MRPL46Q9H2W6 279 aaKnown RBP6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 GSTO2Q9H4Y5 243 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 CD248Q9HCU0 757 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 DDX21Q9NR30 783 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 SLC45A2Q9UMX9 530 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 PCDHA6Q9UN73 950 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 ITSN2Q9NZM3 1697 aa6.23□□□□□ -1.41
HMGB3P19-201ENST00000403971 KIF14Q15058 1648 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 MAPKBP1O60336 1514 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 PLEKHD1A6NEE1 506 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 IPO13O94829 963 aaKnown RBP6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 POMCP01189 267 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 MYL1P05976 194 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 MTHFD1P11586 935 aaKnown RBP6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 TRIM27P14373 513 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 RABGGTBP53611 331 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 HLTFQ14527 1009 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 UBXN2BQ14CS0 331 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 ATP2B3Q16720 1220 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 CCSAPQ6IQ19 270 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 ZNF585AQ6P3V2 769 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 MAMDC4Q6UXC1 1216 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 MAEAQ7L5Y9 396 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 IL17RDQ8NFM7 739 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 OR10H5Q8NGA6 315 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 ZFP28Q8NHY6 868 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 TNPO1Q92973 898 aaKnown RBP6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 LOXL4Q96JB6 756 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 FAM167AQ96KS9 214 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 APOL5Q9BWW9 433 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 WDCPQ9H6R7 721 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 CHST12Q9NRB3 414 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 POGKQ9P215 609 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 JAG2Q9Y219 1238 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 CDC42BPAQ5VT25 1732 aa6.22□□□□□ -1.41
HMGB3P19-201ENST00000403971 CFAP69A5D8W1 941 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 CDHR4A6H8M9 788 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 PRSS29PA6NIE9 313 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 PRSS23O95084 383 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 MATN4O95460 622 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 AMHP03971 560 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 HRGP04196 525 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 ITGB1P05556 798 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 HDCP19113 662 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 SCNN1GP51170 649 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 CHN2P52757 468 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 PURAQ00577 322 aaKnown RBP6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 HHEXQ03014 270 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 PLP2Q04941 152 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 VPS72Q15906 364 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 CCDC93Q567U6 631 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 RNF220Q5VTB9 566 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 APOA5Q6Q788 366 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 MED25Q71SY5 747 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 GSPT2Q8IYD1 628 aaKnown RBP6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 ANKRD35Q8N283 1001 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 FAM43AQ8N2R8 423 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 PJA1Q8NG27 643 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 TTC17Q96AE7 1141 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 MTFMTQ96DP5 389 aaKnown RBP6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 PACSIN1Q9BY11 444 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 C22orf23Q9BZE7 217 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 MYO5CQ9NQX4 1742 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 NCOA2Q15596 1464 aa6.21□□□□□ -1.42
HMGB3P19-201ENST00000403971 KLRG2A4D1S0 409 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 DRGXA6NNA5 263 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 LEFTY2O00292 366 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 SLC43A1O75387 559 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 FTH1P19P0C7X4 201 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms