RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 N4BP1O75113 896 aaKnown RBP35.88■■■■□ 3.33
CSNK1E-204ENST00000403904 ALDH7A1P49419 539 aaKnown RBP35.88■■■■□ 3.33
CSNK1E-204ENST00000403904 RBP5P82980 135 aa35.88■■■■□ 3.33
CSNK1E-204ENST00000403904 TRPC3Q13507 836 aa35.88■■■■□ 3.33
CSNK1E-204ENST00000403904 NCOA4Q13772 614 aa35.88■■■■□ 3.33
CSNK1E-204ENST00000403904 FAN1Q9Y2M0 1017 aa35.88■■■■□ 3.33
CSNK1E-204ENST00000403904 R3HCC1Q9Y3T6 440 aaKnown RBP35.88■■■■□ 3.33
CSNK1E-204ENST00000403904 CHD9Q3L8U1 2897 aa35.88■■■■□ 3.33
CSNK1E-204ENST00000403904 LINC01553A4QN01 128 aa35.87■■■■□ 3.33
CSNK1E-204ENST00000403904 ARHGEF15O94989 841 aa35.87■■■■□ 3.33
CSNK1E-204ENST00000403904 HLA-DRAP01903 254 aa35.87■■■■□ 3.33
CSNK1E-204ENST00000403904 LINC00271P0C7V0 271 aa35.87■■■■□ 3.33
CSNK1E-204ENST00000403904 PIK3CAP42336 1068 aa35.87■■■■□ 3.33
CSNK1E-204ENST00000403904 C3orf58Q8NDZ4 430 aa35.87■■■■□ 3.33
CSNK1E-204ENST00000403904 FBXL13Q8NEE6 735 aa35.87■■■■□ 3.33
CSNK1E-204ENST00000403904 NAP1L5Q96NT1 182 aaPredicted RBP35.87■■■■□ 3.33
CSNK1E-204ENST00000403904 LRRN2O75325 713 aa35.86■■■■□ 3.33
CSNK1E-204ENST00000403904 LAG3P18627 525 aa35.86■■■■□ 3.33
CSNK1E-204ENST00000403904 MYL6P60660 151 aa35.86■■■■□ 3.33
CSNK1E-204ENST00000403904 KCNT2Q6UVM3 1135 aa35.86■■■■□ 3.33
CSNK1E-204ENST00000403904 HASPINQ8TF76 798 aa35.86■■■■□ 3.33
CSNK1E-204ENST00000403904 SEMA4DQ92854 862 aa35.86■■■■□ 3.33
CSNK1E-204ENST00000403904 CLP1Q92989 425 aaKnown RBP35.86■■■■□ 3.33
CSNK1E-204ENST00000403904 PMM2O15305 246 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 B3GAT3O94766 335 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 PRPF38BQ5VTL8 546 aaKnown RBP35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 DCLRE1AQ6PJP8 1040 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 COLGALT1Q8NBJ5 622 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 ELMO3Q96BJ8 720 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 ZNF558Q96NG5 402 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 CRACR2AQ9BSW2 395 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 UTP3Q9NQZ2 479 aaKnown RBP eCLIP35.85■■■■□ 3.331e-6■■■■■ 83.4
CSNK1E-204ENST00000403904 MSRAQ9UJ68 235 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 COQ4Q9Y3A0 265 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 NLRC5Q86WI3 1866 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 LGALS16A8MUM7 142 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 P4HA2O15460 535 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 KIF4AO95239 1232 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 ITGB1P05556 798 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 RAB20Q9NX57 234 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 CHD7Q9P2D1 2997 aa35.85■■■■□ 3.33
CSNK1E-204ENST00000403904 PLCB2Q00722 1185 aa35.84■■■■□ 3.33
CSNK1E-204ENST00000403904 CETN1Q12798 172 aa35.84■■■■□ 3.33
CSNK1E-204ENST00000403904 RAB30Q15771 203 aa35.84■■■■□ 3.33
CSNK1E-204ENST00000403904 EPC2Q52LR7 807 aa35.84■■■■□ 3.33
CSNK1E-204ENST00000403904 TMEM173Q86WV6 379 aaPredicted RBP35.84■■■■□ 3.33
CSNK1E-204ENST00000403904 PI4K2AQ9BTU6 479 aa35.84■■■■□ 3.33
CSNK1E-204ENST00000403904 UBASH3AP57075 661 aa35.83■■■■□ 3.33
CSNK1E-204ENST00000403904 FILIP1LQ4L180 1135 aa35.83■■■■□ 3.33
CSNK1E-204ENST00000403904 CD300LGQ6UXG3 332 aa35.83■■■■□ 3.33
CSNK1E-204ENST00000403904 SPRED2Q7Z698 418 aa35.83■■■■□ 3.33
CSNK1E-204ENST00000403904 LRRC52Q8N7C0 313 aa35.83■■■■□ 3.33
CSNK1E-204ENST00000403904 HPDLQ96IR7 371 aa35.83■■■■□ 3.33
CSNK1E-204ENST00000403904 COLEC11Q9BWP8 271 aa35.83■■■■□ 3.33
CSNK1E-204ENST00000403904 RTN4Q9NQC3 1192 aaKnown RBP35.83■■■■□ 3.33
CSNK1E-204ENST00000403904 AAASQ9NRG9 546 aa35.83■■■■□ 3.33
CSNK1E-204ENST00000403904 MARCH5Q9NX47 278 aa35.83■■■■□ 3.33
CSNK1E-204ENST00000403904 IFNKQ9P0W0 207 aa35.83■■■■□ 3.33
CSNK1E-204ENST00000403904 A0A1B0GTH6 734 aa35.82■■■■□ 3.32
CSNK1E-204ENST00000403904 A0A1W2PPC1 479 aa35.82■■■■□ 3.32
CSNK1E-204ENST00000403904 CLSTN1O94985 981 aa35.82■■■■□ 3.32
CSNK1E-204ENST00000403904 LILRA4P59901 499 aa35.82■■■■□ 3.32
CSNK1E-204ENST00000403904 UBXN1Q04323 297 aa35.82■■■■□ 3.32
CSNK1E-204ENST00000403904 XYLT2Q9H1B5 865 aa35.82■■■■□ 3.32
CSNK1E-204ENST00000403904 NKX2-4Q9H2Z4 354 aa35.82■■■■□ 3.32
CSNK1E-204ENST00000403904 GCNT4Q9P109 453 aa35.82■■■■□ 3.32
CSNK1E-204ENST00000403904 SPTLC1O15269 473 aa35.81■■■■□ 3.32
CSNK1E-204ENST00000403904 TEX33O43247 280 aa35.81■■■■□ 3.32
CSNK1E-204ENST00000403904 FKBP15Q5T1M5 1219 aa35.81■■■■□ 3.32
CSNK1E-204ENST00000403904 BCL7CQ8WUZ0 217 aaPredicted RBP35.81■■■■□ 3.32
CSNK1E-204ENST00000403904 ZNF560Q96MR9 790 aa35.81■■■■□ 3.32
CSNK1E-204ENST00000403904 C17orf80Q9BSJ5 609 aa35.81■■■■□ 3.32
CSNK1E-204ENST00000403904 NUB1Q9Y5A7 615 aa35.81■■■■□ 3.32
CSNK1E-204ENST00000403904 PCDHB12Q9Y5F1 795 aa35.81■■■■□ 3.32
CSNK1E-204ENST00000403904 TAF6P49848 677 aa35.81■■■■□ 3.32
CSNK1E-204ENST00000403904 MYO1EQ12965 1108 aa35.81■■■■□ 3.32
CSNK1E-204ENST00000403904 SGSM1Q2NKQ1 1148 aa35.81■■■■□ 3.32
CSNK1E-204ENST00000403904 GBP6Q6ZN66 633 aa35.81■■■■□ 3.32
CSNK1E-204ENST00000403904 GTPBP10A4D1E9 387 aaKnown RBP35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 TMEM189-UBE2V1I3L0A0 370 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 AP5Z1O43299 807 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 TADA2AO75478 443 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 PNPLA4P41247 253 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 SMAD3P84022 425 aaKnown RBP35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 TAP1Q03518 808 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 EXOC3L4Q17RC7 722 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 ZNF699Q32M78 642 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 SPOPLQ6IQ16 392 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 SLC39A11Q8N1S5 342 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 EHBP1Q8NDI1 1231 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 LMO3Q8TAP4 145 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 ADAM28Q9UKQ2 775 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 MTUS1Q9ULD2 1270 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 TRIOBPQ9H2D6 2365 aa35.8■■■■□ 3.32
CSNK1E-204ENST00000403904 ASS1P00966 412 aaKnown RBP35.79■■■■□ 3.32
CSNK1E-204ENST00000403904 SLC9A1P19634 815 aa35.79■■■■□ 3.32
CSNK1E-204ENST00000403904 DNAJB2P25686 324 aa35.79■■■■□ 3.32
CSNK1E-204ENST00000403904 ATICP31939 592 aa35.79■■■■□ 3.32
CSNK1E-204ENST00000403904 BRCC3P46736 316 aa35.79■■■■□ 3.32
CSNK1E-204ENST00000403904 NR1I3Q14994 352 aa35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms