RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 TMC2Q8TDI7 906 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 ANKRD36BP1Q96IX9 119 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 NGRNQ9NPE2 291 aaKnown RBP18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 CHST7Q9NS84 486 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 RWDD2AQ9UIY3 292 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 AGAP1Q9UPQ3 857 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 C2CD2LO14523 706 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 SPTLC1O15269 473 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TRAPPC3O43617 180 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 KRT19P08727 400 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 EPB41P11171 864 aaKnown RBP18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 KRT13P13646 458 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 POLR2BP30876 1174 aaKnown RBP18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 LILRA4P59901 499 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 CLDN10P78369 228 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 SMC1AQ14683 1233 aaKnown RBP18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 USP41Q3LFD5 358 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TCEAL5Q5H9L2 206 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 RTP2Q5QGT7 225 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 KIAA0319Q5VV43 1072 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 PDE12Q6L8Q7 609 aaKnown RBP18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 KIAA1841Q6NSI8 718 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 FOXR2Q6PJQ5 311 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 INTS8Q75QN2 995 aaKnown RBP18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TRAPPC11Q7Z392 1133 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 FILIP1Q7Z7B0 1213 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 RBM23Q86U06 439 aaKnown RBP18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 CEP57Q86XR8 500 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 SYAP1Q96A49 352 aaPredicted RBP18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 BORCS6Q96GS4 357 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 MKNK1Q9BUB5 465 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 SRRTQ9BXP5 876 aaKnown RBP18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 NSUN3Q9H649 340 aaKnown RBP18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 STK39Q9UEW8 545 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 SIX4Q9UIU6 781 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 STXBP5LQ9Y2K9 1186 aa18.56■□□□□ 0.56
PTCHD3P3-201ENST00000403073 NLRC5Q86WI3 1866 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 C2orf71A6NGG8 1288 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 PER2O15055 1255 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 CST3P01034 146 aaPredicted RBP18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TRIM49P0CI25 452 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TRIM49CP0CI26 452 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 GLUD2P49448 558 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 RBP5P82980 135 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 DSG1Q02413 1049 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 ELAVL2Q12926 359 aaKnown RBP18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 BMS1Q14692 1282 aaKnown RBP18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 NFKBIBQ15653 356 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 PTPN14Q15678 1187 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 RIN2Q8WYP3 895 aaPredicted RBP18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 CEP63Q96MT8 703 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TTPALQ9BTX7 342 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 MRPL17Q9NRX2 175 aaKnown RBP18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 DACH1Q9UI36 760 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 ITGA11Q9UKX5 1188 aa18.55■□□□□ 0.56
PTCHD3P3-201ENST00000403073 COL4A4P53420 1690 aaPredicted RBP18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 SLC16A3O15427 465 aaKnown RBP18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 LILRB3O75022 631 aa18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 C4BPAP04003 597 aaKnown RBP18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 URODP06132 367 aa18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 FGFR3P22607 806 aa18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TKTP29401 623 aaKnown RBP18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 GTF2F1P35269 517 aaKnown RBP eCLIP18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 BFSP1Q12934 665 aa18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 SKOR2Q2VWA4 1001 aaPredicted RBP18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 PRSS55Q6UWB4 352 aaPredicted RBP18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 DSTYKQ6XUX3 929 aa18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 SUSD3Q96L08 255 aa18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 IGFLR1Q9H665 355 aa18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TLE6Q9H808 572 aa18.54■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TDRD15B5MCY1 1934 aaKnown RBP18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 IKBKBO14920 756 aa18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 PHACTR2O75167 634 aa18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 ERCC5P28715 1186 aaPredicted RBP18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 NRIP1P48552 1158 aa18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 AARSP49588 968 aaKnown RBP eCLIP18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TAF6P49848 677 aa18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 AP3M2P53677 418 aa18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 PPP3CAQ08209 521 aa18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 HYAL1Q12794 435 aa18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 CCDC40Q4G0X9 1142 aa18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TDRD10Q5VZ19 366 aaKnown RBP18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 USP37Q86T82 979 aa18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 LNX1Q8TBB1 728 aaPredicted RBP18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 MMRN2Q9H8L6 949 aa18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 ANO10Q9NW15 660 aa18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 ARMCX3Q9UH62 379 aaPredicted RBP18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 R3HCC1Q9Y3T6 440 aaKnown RBP18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TIMM13Q9Y5L4 95 aaPredicted RBP18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 IRAK3Q9Y616 596 aa18.53■□□□□ 0.56
PTCHD3P3-201ENST00000403073 PLXNA4Q9HCM2 1894 aa18.52■□□□□ 0.56
PTCHD3P3-201ENST00000403073 KPNA7A9QM74 516 aa18.52■□□□□ 0.56
PTCHD3P3-201ENST00000403073 M0QZQ0 153 aa18.52■□□□□ 0.56
PTCHD3P3-201ENST00000403073 CNPP09543 421 aaKnown RBP18.52■□□□□ 0.56
PTCHD3P3-201ENST00000403073 RPL17P18621 184 aaKnown RBP18.52■□□□□ 0.56
PTCHD3P3-201ENST00000403073 PNPLA4P41247 253 aa18.52■□□□□ 0.56
PTCHD3P3-201ENST00000403073 GCLMP48507 274 aa18.52■□□□□ 0.56
PTCHD3P3-201ENST00000403073 MCCD1P59942 119 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms