RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 KCTD10Q9H3F6 313 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 NUB1Q9Y5A7 615 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 ZNF233A6NK53 670 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 I3L4J1 428 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 EPCAMP16422 314 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 TKTP29401 623 aaKnown RBP20.81■□□□□ 0.92
RTN4-207ENST00000402434 AARSP49588 968 aaKnown RBP eCLIP20.81■□□□□ 0.925e-8■■■□□ 16.6
RTN4-207ENST00000402434 SMAD4Q13485 552 aaKnown RBP20.81■□□□□ 0.92
RTN4-207ENST00000402434 CBWD2Q8IUF1 395 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 GSDMAQ96QA5 445 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 CLSTN3Q9BQT9 956 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 S1PR5Q9H228 398 aa20.81■□□□□ 0.92
RTN4-207ENST00000402434 TCF20Q9UGU0 1960 aaKnown RBP20.8■□□□□ 0.92
RTN4-207ENST00000402434 PIRO00625 290 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 PDXKO00764 312 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 SYN3O14994 580 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 CLIC2O15247 247 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 MBTPS2O43462 519 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 KIF20AO95235 890 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 PAX3P23760 479 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 CLUL1Q15846 466 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 C9orf57Q5W0N0 161 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 XXYLT1Q8NBI6 393 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 PDE11AQ9HCR9 933 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 DPP3Q9NY33 737 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 HOOK1Q9UJC3 728 aaKnown RBP20.8■□□□□ 0.92
RTN4-207ENST00000402434 FAM50BQ9Y247 325 aa20.8■□□□□ 0.92
RTN4-207ENST00000402434 CUL9Q8IWT3 2517 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 M0QZQ0 153 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 PPEF2O14830 753 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 KINO60870 393 aaKnown RBP20.79■□□□□ 0.92
RTN4-207ENST00000402434 MCM4P33991 863 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 LILRA4P59901 499 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 UBE2HP62256 183 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 SMAD2Q15796 467 aaKnown RBP20.79■□□□□ 0.92
RTN4-207ENST00000402434 PSMD5Q16401 504 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 SNRNP35Q16560 246 aaKnown RBP20.79■□□□□ 0.92
RTN4-207ENST00000402434 LILRA6Q6PI73 481 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 ANKS3Q6ZW76 656 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 SLC9A9Q8IVB4 645 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 GUF1Q8N442 669 aaKnown RBP20.79■□□□□ 0.92
RTN4-207ENST00000402434 TSHZ2Q9NRE2 1034 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 DZANK1Q9NVP4 752 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 DMAC2Q9NW81 257 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 MTRRQ9UBK8 725 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 PCDHA5Q9Y5H7 936 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 BACE2Q9Y5Z0 518 aa20.79■□□□□ 0.92
RTN4-207ENST00000402434 RPL17P18621 184 aaKnown RBP20.78■□□□□ 0.92
RTN4-207ENST00000402434 CYP2J2P51589 502 aa20.78■□□□□ 0.92
RTN4-207ENST00000402434 MRPL58Q14197 206 aaKnown RBP20.78■□□□□ 0.92
RTN4-207ENST00000402434 SURF1Q15526 300 aa20.78■□□□□ 0.92
RTN4-207ENST00000402434 ADAMTS19Q8TE59 1207 aa20.78■□□□□ 0.92
RTN4-207ENST00000402434 NOC3LQ8WTT2 800 aaKnown RBP20.78■□□□□ 0.92
RTN4-207ENST00000402434 CACTINQ8WUQ7 758 aaKnown RBP20.78■□□□□ 0.92
RTN4-207ENST00000402434 COL25A1Q9BXS0 654 aaPredicted RBP20.78■□□□□ 0.92
RTN4-207ENST00000402434 RMND1Q9NWS8 449 aa20.78■□□□□ 0.92
RTN4-207ENST00000402434 TRAF3IP3Q9Y228 551 aa20.78■□□□□ 0.92
RTN4-207ENST00000402434 TGM5O43548 720 aa20.77■□□□□ 0.92
RTN4-207ENST00000402434 TBC1D4O60343 1298 aa20.77■□□□□ 0.92
RTN4-207ENST00000402434 SMC2O95347 1197 aa20.77■□□□□ 0.92
RTN4-207ENST00000402434 GLUD1P00367 558 aa20.77■□□□□ 0.92
RTN4-207ENST00000402434 IL9P15248 144 aa20.77■□□□□ 0.92
RTN4-207ENST00000402434 TFAMQ00059 246 aaKnown RBP20.77■□□□□ 0.92
RTN4-207ENST00000402434 VARS2Q5ST30 1063 aaKnown RBP20.77■□□□□ 0.92
RTN4-207ENST00000402434 RDH13Q8NBN7 331 aa20.77■□□□□ 0.92
RTN4-207ENST00000402434 HDAC7Q8WUI4 952 aa20.77■□□□□ 0.92
RTN4-207ENST00000402434 SUSD6Q92537 303 aa20.77■□□□□ 0.92
RTN4-207ENST00000402434 PCDHB8Q9UN66 801 aa20.77■□□□□ 0.92
RTN4-207ENST00000402434 SPTLC1O15269 473 aa20.76■□□□□ 0.91
RTN4-207ENST00000402434 ITIH3Q06033 890 aa20.76■□□□□ 0.91
RTN4-207ENST00000402434 MYBPC2Q14324 1141 aa20.76■□□□□ 0.91
RTN4-207ENST00000402434 PALB2Q86YC2 1186 aa20.76■□□□□ 0.91
RTN4-207ENST00000402434 APPL2Q8NEU8 664 aa20.76■□□□□ 0.91
RTN4-207ENST00000402434 CXorf38Q8TB03 319 aa20.76■□□□□ 0.91
RTN4-207ENST00000402434 MFSD14AQ96MC6 490 aa20.76■□□□□ 0.91
RTN4-207ENST00000402434 ADAM7Q9H2U9 754 aa20.76■□□□□ 0.91
RTN4-207ENST00000402434 DPP7Q9UHL4 492 aa20.76■□□□□ 0.91
RTN4-207ENST00000402434 MAPK8IP1Q9UQF2 711 aa20.76■□□□□ 0.91
RTN4-207ENST00000402434 USP15Q9Y4E8 981 aaPredicted RBP20.76■□□□□ 0.91
RTN4-207ENST00000402434 SCN1AP35498 2009 aa20.76■□□□□ 0.91
RTN4-207ENST00000402434 ADAM12O43184 909 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 EXOC3O60645 756 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 PRPF40AO75400 957 aaKnown RBP20.75■□□□□ 0.91
RTN4-207ENST00000402434 OR1D2P34982 312 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 CYP24A1Q07973 514 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 RAB33AQ14088 237 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 PSMD6Q15008 389 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 COBLL1Q53SF7 1204 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 SLC8B1Q6J4K2 584 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 RSPO2Q6UXX9 243 aaPredicted RBP20.75■□□□□ 0.91
RTN4-207ENST00000402434 GLYCTKQ8IVS8 523 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 C1orf127Q8N9H9 656 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 ERCC4Q92889 916 aaPredicted RBP20.75■□□□□ 0.91
RTN4-207ENST00000402434 SMARCE1Q969G3 411 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 GTPBP4Q9BZE4 634 aaKnown RBP20.75■□□□□ 0.91
RTN4-207ENST00000402434 PLEKHA4Q9H4M7 779 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 INTS13Q9NVM9 706 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 H7C4K7 107 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 OAZ2O95190 189 aa20.75■□□□□ 0.91
RTN4-207ENST00000402434 PAPLNO95428 1278 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms