RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 PTGESO14684 152 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
SKA3-203ENST00000400018 CDK7P50613 346 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 RSPH3Q86UC2 560 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 GSTCDQ8NEC7 633 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 TWNKQ96RR1 684 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 SMIM28A0A1B0GU29 152 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 SPTLC1O15269 473 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 CLTAP09496 248 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 MCF2P10911 925 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 CTCFP49711 727 aaPredicted RBP12.58□□□□□ -0.4
SKA3-203ENST00000400018 DNA2P51530 1060 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 BCAR1P56945 870 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 NKX3-2P78367 333 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 KLHL30Q0D2K2 578 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 FOXR2Q6PJQ5 311 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 TMEM270Q6UE05 265 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 SLC30A5Q8TAD4 765 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 PPP1R13BQ96KQ4 1090 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 PRIMPOLQ96LW4 560 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 MMS19Q96T76 1030 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 DEF6Q9H4E7 631 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 PPP2R2CQ9Y2T4 447 aa12.58□□□□□ -0.4
SKA3-203ENST00000400018 LDHAP00338 332 aaKnown RBP12.57□□□□□ -0.4
SKA3-203ENST00000400018 ITGB1P05556 798 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 PRMT2P55345 433 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 PPP2R3AQ06190 1150 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 PTK7Q13308 1070 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 TRPC3Q13507 836 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 TMEM132DQ14C87 1099 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 DUOXA2Q1HG44 320 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 LRRC8DQ7L1W4 858 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 C3orf58Q8NDZ4 430 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 TMC2Q8TDI7 906 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 HIPK3Q9H422 1215 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 SALL4Q9UJQ4 1053 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 NT5C1B-RDH14C9J2C7 533 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 MMEP08473 750 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 ABCB4P21439 1286 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 JAM2P57087 298 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 NCBP1Q09161 790 aaKnown RBP12.57□□□□□ -0.4
SKA3-203ENST00000400018 MYBPC2Q14324 1141 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 ASIC2Q16515 512 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 REXO1L1PQ8IX06 675 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 CCAR2Q8N163 923 aaKnown RBP12.57□□□□□ -0.4
SKA3-203ENST00000400018 PANX2Q96RD6 677 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 XYLT2Q9H1B5 865 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 ERVK-5Q9HDB9 667 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 DPP3Q9NY33 737 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 NME7Q9Y5B8 376 aa12.57□□□□□ -0.4
SKA3-203ENST00000400018 EPN1Q9Y6I3 576 aaPredicted RBP12.57□□□□□ -0.4
SKA3-203ENST00000400018 MACROD2A1Z1Q3 448 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 BUB1O43683 1085 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 AKR1B10O60218 316 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 NDUFA10O95299 355 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 GJB6O95452 261 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 CHRM1P11229 460 aaPredicted RBP12.56□□□□□ -0.4
SKA3-203ENST00000400018 KIF11P52732 1056 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 POU5F1BQ06416 359 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.56□□□□□ -0.4
SKA3-203ENST00000400018 NOP9Q86U38 636 aaKnown RBP12.56□□□□□ -0.4
SKA3-203ENST00000400018 SLC43A3Q8NBI5 491 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 CXorf38Q8TB03 319 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 LNX1Q8TBB1 728 aaPredicted RBP12.56□□□□□ -0.4
SKA3-203ENST00000400018 B3GALT6Q96L58 329 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 SNX27Q96L92 541 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 CCDC42Q96M95 316 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 NT5C1BQ96P26 610 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 GUCA1BQ9UMX6 200 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 ADGRG1Q9Y653 693 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 TRIM43BA6NCK2 446 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 GRM5P41594 1212 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 TSR1Q2NL82 804 aaKnown RBP12.56□□□□□ -0.4
SKA3-203ENST00000400018 ZNF699Q32M78 642 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 ZNF280BQ86YH2 543 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 NME8Q8N427 588 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 PDCL2Q8N4E4 241 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 C12orf29Q8N999 325 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 ZNF397Q8NF99 534 aaPredicted RBP12.56□□□□□ -0.4
SKA3-203ENST00000400018 OLIG1Q8TAK6 271 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 TRIM43Q96BQ3 446 aaPredicted RBP12.56□□□□□ -0.4
SKA3-203ENST00000400018 ZBTB9Q96C00 473 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 PCDHB18PQ96TA0 734 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 ZSWIM1Q9BR11 485 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 HYOU1Q9Y4L1 999 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 SNX9Q9Y5X1 595 aa12.56□□□□□ -0.4
SKA3-203ENST00000400018 ARL5CA6NH57 179 aa12.55□□□□□ -0.4
SKA3-203ENST00000400018 CD4P01730 458 aa12.55□□□□□ -0.4
SKA3-203ENST00000400018 PDGFRBP09619 1106 aa12.55□□□□□ -0.4
SKA3-203ENST00000400018 CLCNKBP51801 687 aa12.55□□□□□ -0.4
SKA3-203ENST00000400018 CYP26C1Q6V0L0 522 aa12.55□□□□□ -0.4
SKA3-203ENST00000400018 CPNE8Q86YQ8 564 aa12.55□□□□□ -0.4
SKA3-203ENST00000400018 WDR49Q8IV35 697 aa12.55□□□□□ -0.4
SKA3-203ENST00000400018 VWCEQ96DN2 955 aa12.55□□□□□ -0.4
SKA3-203ENST00000400018 ANKRD36BP1Q96IX9 119 aa12.55□□□□□ -0.4
SKA3-203ENST00000400018 TSEN34Q9BSV6 310 aaKnown RBP12.55□□□□□ -0.4
SKA3-203ENST00000400018 C1orf112Q9NSG2 853 aa12.55□□□□□ -0.4
SKA3-203ENST00000400018 PCDHB4Q9Y5E5 795 aa12.55□□□□□ -0.4
SKA3-203ENST00000400018 MYO9BQ13459 2157 aa12.55□□□□□ -0.4
SKA3-203ENST00000400018 STX10O60499 249 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms