RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 GPD1LQ8N335 351 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 MRPS31Q92665 395 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 CENPTQ96BT3 561 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 TGS1Q96RS0 853 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 EMILIN2Q9BXX0 1053 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 OSBPL5Q9H0X9 879 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 PIH1D3Q9NQM4 214 aaKnown RBP11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 TMEM161AQ9NX61 479 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 SLC9A2Q9UBY0 812 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 NCKAP1Q9Y2A7 1128 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 TET3O43151 1660 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 TLR2O60603 784 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 GUCA1CO95843 209 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 HIST1H2AGP0C0S8 130 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 HIST1H2ADP20671 130 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 GFPT1Q06210 699 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 INPP5AQ14642 412 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 TRIM72Q6ZMU5 477 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 RNF149Q8NC42 400 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 HIST1H2AHQ96KK5 128 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 FAM161BQ96MY7 647 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 HIST1H2AJQ99878 128 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 H2AFJQ9BTM1 129 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 PARVAQ9NVD7 372 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 ABI2Q9NYB9 513 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 AP3B1O00203 1094 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 APOA1P02647 267 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 GPR1P46091 355 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 LRRC74AQ0VAA2 488 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 DGKZQ13574 1117 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 FAM102AQ5T9C2 384 aaPredicted RBP11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 HOMEZQ8IX15 550 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 CCDC3Q9BQI4 270 aa11.6□□□□□ -0.55
CACNA1C-215ENST00000399637 GRID2IPA4D2P6 1211 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 H0Y3Z8 333 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 KCNQ2O43526 872 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 PRMT3O60678 531 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 SKAP2O75563 359 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 NDUFV1P49821 464 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 PROSER3Q2NL68 480 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 ZBED8Q8IZ13 594 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 SNX31Q8N9S9 440 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 ALDH8A1Q9H2A2 487 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 CAB39Q9Y376 341 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 ZDHHC9Q9Y397 364 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 PNMA6AP0CW24 399 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 CYP2C9P11712 490 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 VCLP18206 1134 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 SCNN1BP51168 640 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 SPDYAQ5MJ70 313 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 SHCBP1Q8NEM2 672 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 MYOZ2Q9NPC6 264 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 H2AFY2Q9P0M6 372 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 GTF2A1LQ9UNN4 478 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 OVOS2A0A0G2JMS6 1433 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 OVOS2A0A0J9YW53 1432 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 OVOS2Q6IE36 1432 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 TPI1P60174 286 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 RARS2Q5T160 578 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 SMIM5Q71RC9 77 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 TNIP3Q96KP6 325 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 ZNF556Q9HAH1 456 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 ADARB2Q9NS39 739 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 BFARQ9NZS9 450 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 CHRNA3P32297 505 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 MAGEA9P43362 315 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 HDDC2Q7Z4H3 204 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 PLEKHH3Q7Z736 793 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 CATSPER1Q8NEC5 780 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 GOLPH3LQ9H4A5 285 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 SMARCAD1Q9H4L7 1026 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 PSD3Q9NYI0 1048 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 GGT7Q9UJ14 662 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 CDK12Q9NYV4 1490 aaPredicted RBP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 TARSL2A2RTX5 802 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 RASSF10A6NK89 507 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 CCDC22O60826 627 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 WDR47O94967 919 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 GGPS1O95749 300 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 P4HBP07237 508 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 SOX11P35716 441 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 BCAR1P56945 870 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 CDC42EP1Q00587 391 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 FBXO38Q6PIJ6 1188 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 PCSK9Q8NBP7 692 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 ARL8AQ96BM9 186 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 DBR1Q9UK59 544 aaKnown RBP11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 APPL1Q9UKG1 709 aa11.59□□□□□ -0.55
CACNA1C-215ENST00000399637 ANGPT2O15123 496 aa11.58□□□□□ -0.55
CACNA1C-215ENST00000399637 ATP9BO43861 1147 aa11.58□□□□□ -0.55
CACNA1C-215ENST00000399637 CYP2C19P33261 490 aa11.58□□□□□ -0.55
CACNA1C-215ENST00000399637 ST13P50502 369 aaKnown RBP11.58□□□□□ -0.55
CACNA1C-215ENST00000399637 STAT5BP51692 787 aa11.58□□□□□ -0.55
CACNA1C-215ENST00000399637 ICE2Q659A1 982 aa11.58□□□□□ -0.55
CACNA1C-215ENST00000399637 ARHGEF3Q9NR81 526 aa11.58□□□□□ -0.55
CACNA1C-215ENST00000399637 DCTN4Q9UJW0 460 aa11.58□□□□□ -0.55
CACNA1C-215ENST00000399637 ARF4P18085 180 aaPredicted RBP11.58□□□□□ -0.56
CACNA1C-215ENST00000399637 PWP1Q13610 501 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms