RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 DUX4L4P0CJ87 422 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 DUX4L5P0CJ88 424 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 DUX4L6P0CJ89 424 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 DUX4L7P0CJ90 424 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 ODC1P11926 461 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 KLRC3Q07444 240 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 FNDC3BQ53EP0 1204 aaKnown RBP11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 RGS9BPQ6ZS82 235 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 ZC3H18Q86VM9 953 aaKnown RBP11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 ARHGEF25Q86VW2 580 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 ATPAF2Q8N5M1 289 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 EXD1Q8NHP7 514 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 HASPINQ8TF76 798 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 DDI1Q8WTU0 396 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 KLK14Q9P0G3 267 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 DUX4Q9UBX2 424 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 MROH7-TTC4A0A0A0MT08 1334 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 CDC42BPAQ5VT25 1732 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 CYP27B1O15528 508 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 AKAP5P24588 427 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 PRKAA1Q13131 559 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 EFCAB12Q6NXP0 572 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 TRAF7Q6Q0C0 670 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 PYROXD1Q8WU10 500 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 MRPL40Q9NQ50 206 aaKnown RBP11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 CDC42BPBQ9Y5S2 1711 aa11.52□□□□□ -0.56
CACNA1C-210ENST00000399606 A0A087WWV3 80 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 CCDC195A0A1B0GUA6 201 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 POLRMTO00411 1230 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 CD4P01730 458 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 SLFN14P0C7P3 912 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 TRPC1P48995 793 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 ALDH18A1P54886 795 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 PLTPP55058 493 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 ZNF177Q13360 481 aaPredicted RBP11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 ZRANB3Q5FWF4 1079 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 PI16Q6UXB8 463 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 TNS4Q8IZW8 715 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 UXS1Q8NBZ7 420 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 RUBCNQ92622 972 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 TMEM143Q96AN5 459 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 ABCC12Q96J65 1359 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 NDUFS3O75489 264 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 TJP3O95049 919 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 P4HBP07237 508 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 SMARCA1P28370 1054 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 PRDX5P30044 214 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 TCEA2Q15560 299 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 VPS72Q15906 364 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 TEDDM1Q5T9Z0 273 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 CCSAPQ6IQ19 270 aaPredicted RBP11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 BTNL9Q6UXG8 535 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 ITIH5Q86UX2 942 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 CCNYL1Q8N7R7 359 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 ARHGAP9Q9BRR9 750 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 CINPQ9BW66 212 aaPredicted RBP11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 RUBCNLQ9H714 662 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 DNAJC12Q9UKB3 198 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 KYNUQ16719 465 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 COBLL1Q53SF7 1204 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 FAM47EQ6ZV65 393 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 CELF1Q92879 486 aaKnown RBP11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 NFU1Q9UMS0 254 aa11.52□□□□□ -0.57
CACNA1C-210ENST00000399606 IQGAP1P46940 1657 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 RRN3P2A6NIE6 340 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 SEC31AO94979 1220 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 RPS12P25398 132 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 GNA15P30679 374 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 RBBP4Q09028 425 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 CBFBQ13951 182 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 DMC1Q14565 340 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 USP6P35125 1406 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 GOLGA8MH3BSY2 632 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 CTNND1O60716 968 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 RGS7P49802 495 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 PLD1Q13393 1074 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 SLC25A41Q8N5S1 370 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 POMGNT2Q8NAT1 580 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 SLC16A10Q8TF71 515 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 SH3GL2Q99962 352 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 RPS6KB2Q9UBS0 482 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 EPN1Q9Y6I3 576 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 EXOC1LA0A1B0GW35 172 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 DDNO94850 711 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 PSMA3P25788 255 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 SLC11A2P49281 568 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 MED21Q13503 144 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 NLRP14Q86W24 1093 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 C7orf61Q8IZ16 206 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 ARL8AQ96BM9 186 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 SOHLH2Q9NX45 425 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 UTYO14607 1347 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 TIPRLO75663 272 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 TSPAN9O75954 239 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 ENDOD1O94919 500 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms