RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 CTNND2Q9UQB3 1225 aa11.3□□□□□ -0.6
CYCSP55-201ENST00000399027 LRRIQ3A6PVS8 624 aaPredicted RBP11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 TRAPPC3O43617 180 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 LILRB3O75022 631 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 TMEM191BP0C7N4 346 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 FGFR3P22607 806 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 GLUD2P49448 558 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 GUCY2FP51841 1108 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 AP3M2P53677 418 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 TFAMQ00059 246 aaKnown RBP11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 DSG1Q02413 1049 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 BFSP1Q12934 665 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 SMC1AQ14683 1233 aaKnown RBP11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 PTPN14Q15678 1187 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 DUOXA2Q1HG44 320 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 USP41Q3LFD5 358 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 DPCR1Q3MIW9 517 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 KIAA0319Q5VV43 1072 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 KLHL10Q6JEL2 608 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 TAS1R1Q7RTX1 841 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 TMC7Q7Z402 723 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 FAM186BQ8IYM0 893 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 MRPL43Q8N983 215 aaKnown RBP11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 OR5B17Q8NGF7 314 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 ZNF516Q92618 1163 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 ANKRD36BP1Q96IX9 119 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 SUSD3Q96L08 255 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 CEP63Q96MT8 703 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 MED15Q96RN5 788 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 FNBP1Q96RU3 617 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 MTMR12Q9C0I1 747 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 ENTPD7Q9NQZ7 604 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 SSX2IPQ9Y2D8 614 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 SSUH2Q9Y2M2 353 aa11.29□□□□□ -0.6
CYCSP55-201ENST00000399027 EYSQ5T1H1 3165 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 PRRC2BQ5JSZ5 2229 aaKnown RBP11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 C2orf71A6NGG8 1288 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 M0QZQ0 153 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 PPEF2O14830 753 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 IKBKBO14920 756 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 SYN3O14994 580 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 TNNC2P02585 160 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 ITGB3P05106 788 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 DLATP10515 647 aaKnown RBP11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 TNNI1P19237 187 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 ERCC5P28715 1186 aaPredicted RBP11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 PNPLA4P41247 253 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 BRCC3P46736 316 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 VAMP7P51809 220 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 LILRA4P59901 499 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 DLG4P78352 724 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 BMS1Q14692 1282 aaKnown RBP11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 COL19A1Q14993 1142 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 RTP2Q5QGT7 225 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 C1orf220Q5T0J3 134 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 FAM171A1Q5VUB5 890 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 LMBRD2Q68DH5 695 aaPredicted RBP11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 TRAPPC11Q7Z392 1133 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 FILIP1Q7Z7B0 1213 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 ADGRD2Q7Z7M1 963 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 USP37Q86T82 979 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 LRRC52Q8N7C0 313 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 SYAP1Q96A49 352 aaPredicted RBP11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 CCDC127Q96BQ5 260 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 ZNF560Q96MR9 790 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 POP1Q99575 1024 aaKnown RBP11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 RXFP1Q9HBX9 757 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 MRPL17Q9NRX2 175 aaKnown RBP11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 DACH1Q9UI36 760 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 SIX4Q9UIU6 781 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 NUB1Q9Y5A7 615 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 PCDHGC5Q9Y5F6 944 aa11.28□□□□□ -0.6
CYCSP55-201ENST00000399027 FSD2A1L4K1 749 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 HIDE1A8MVS5 230 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 CXCL14O95715 111 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 C4BPAP04003 597 aaKnown RBP11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 URODP06132 367 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 EPB41P11171 864 aaKnown RBP11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 KRT13P13646 458 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 POLR2BP30876 1174 aaKnown RBP11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 TAF6P49848 677 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 MARSP56192 900 aaKnown RBP11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 STX17P56962 302 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 RBP5P82980 135 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 KCNC3Q14003 757 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 MRPL58Q14197 206 aaKnown RBP11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 SKOR2Q2VWA4 1001 aaPredicted RBP11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 SV2CQ496J9 727 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 TCEAL5Q5H9L2 206 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 SCARA3Q6AZY7 606 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 CAVIN1Q6NZI2 390 aaKnown RBP11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 PDXDC1Q6P996 788 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 SASS6Q6UVJ0 657 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 C15orf39Q6ZRI6 1047 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 FRMD5Q7Z6J6 570 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 CSGALNACT2Q8N6G5 542 aa11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 LNX1Q8TBB1 728 aaPredicted RBP11.27□□□□□ -0.61
CYCSP55-201ENST00000399027 MICAL1Q8TDZ2 1067 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms