RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 DEFB118Q96PH6 123 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 NXF3Q9H4D5 531 aaKnown RBP14.06□□□□□ -0.16
TOP3B-202ENST00000398793 CAPN11Q9UMQ6 739 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 EVI5O60447 810 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 CD19P15391 556 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 ARL2P36404 184 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 PSEN2P49810 448 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 NCKAP1LP55160 1127 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 MARCH8Q5T0T0 291 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 KLHDC7AQ5VTJ3 777 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 TLDC1Q6P9B6 456 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 SLC47A2Q86VL8 602 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 BTBD6Q96KE9 485 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 SELENOOQ9BVL4 669 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 MYO6Q9UM54 1294 aa14.06□□□□□ -0.16
TOP3B-202ENST00000398793 REXO2Q9Y3B8 237 aaKnown RBP14.06□□□□□ -0.16
TOP3B-202ENST00000398793 PPP1R37O75864 691 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 SGPL1O95470 568 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 CFHP08603 1231 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 TMEM191BP0C7N4 346 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 NUMBP49757 651 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 MYL6P60660 151 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 ZBED6P86452 979 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 TARBP2Q15633 366 aaKnown RBP14.05□□□□□ -0.16
TOP3B-202ENST00000398793 BRDTQ58F21 947 aaPredicted RBP14.05□□□□□ -0.16
TOP3B-202ENST00000398793 ZFYVE27Q5T4F4 411 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 CYB5D1Q6P9G0 228 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 TMEM270Q6UE05 265 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 FAM228AQ86W67 206 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 SPATS2Q86XZ4 545 aaKnown RBP14.05□□□□□ -0.16
TOP3B-202ENST00000398793 POLIQ9UNA4 740 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 TIMM13Q9Y5L4 95 aaPredicted RBP14.05□□□□□ -0.16
TOP3B-202ENST00000398793 ATXN2Q99700 1313 aaKnown RBP14.05□□□□□ -0.16
TOP3B-202ENST00000398793 I3L4J1 428 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 ZNF185O15231 689 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 EIF3DO15371 548 aaKnown RBP eCLIP14.05□□□□□ -0.16
TOP3B-202ENST00000398793 LYPLA2O95372 231 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 NFICP08651 508 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 AKR1A1P14550 325 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 NAMPTP43490 491 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 CCDC142Q17RM4 750 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 WDR72Q3MJ13 1102 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 IQSEC1Q6DN90 963 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 PPP1R12CQ9BZL4 782 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 IFT122Q9HBG6 1241 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 SPC25Q9HBM1 224 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 ARHGAP28Q9P2N2 729 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 TPX2Q9ULW0 747 aaKnown RBP14.05□□□□□ -0.16
TOP3B-202ENST00000398793 CHD7Q9P2D1 2997 aa14.05□□□□□ -0.16
TOP3B-202ENST00000398793 PQBP1O60828 265 aaKnown RBP14.04□□□□□ -0.16
TOP3B-202ENST00000398793 PECAM1P16284 738 aaPredicted RBP14.04□□□□□ -0.16
TOP3B-202ENST00000398793 MCM3P25205 808 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 C1orf220Q5T0J3 134 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 CCDC181Q5TID7 509 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 IER5Q5VY09 327 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 GDF6Q6KF10 455 aaPredicted RBP14.04□□□□□ -0.16
TOP3B-202ENST00000398793 ZNF571Q7Z3V5 609 aaPredicted RBP14.04□□□□□ -0.16
TOP3B-202ENST00000398793 FRMD5Q7Z6J6 570 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 TMCO2Q7Z6W1 182 aaPredicted RBP14.04□□□□□ -0.16
TOP3B-202ENST00000398793 C18orf25Q96B23 403 aaPredicted RBP14.04□□□□□ -0.16
TOP3B-202ENST00000398793 TBC1D31Q96DN5 1066 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 RNF208Q9H0X6 261 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 GOLGA6L7A0A1B0GV03 622 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 HLA-DRAP01903 254 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 TRPC3Q13507 836 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 CPNE8Q86YQ8 564 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 PIK3R5Q8WYR1 880 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 BAP1Q92560 729 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 MRPL4Q9BYD3 311 aaKnown RBP14.04□□□□□ -0.16
TOP3B-202ENST00000398793 SALL4Q9UJQ4 1053 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 CASP8AP2Q9UKL3 1982 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 PPEF2O14830 753 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 MSCO60682 206 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 UPP2O95045 317 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 INHAP05111 366 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 CYP24A1Q07973 514 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 THEMIS2Q5TEJ8 643 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 TDRD10Q5VZ19 366 aaKnown RBP14.04□□□□□ -0.16
TOP3B-202ENST00000398793 PDXDC1Q6P996 788 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 FAM167AQ96KS9 214 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 PDLIM7Q9NR12 457 aa14.04□□□□□ -0.16
TOP3B-202ENST00000398793 WDR90Q96KV7 1748 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 IGKV6D-21A0A0A0MT36 114 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 ITGB3P05106 788 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 PPP1R2P41236 205 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 SLC8A3P57103 927 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 ACCSLQ4AC99 568 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 SLC9C1Q4G0N8 1177 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 NAA35Q5VZE5 725 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 CCDC50Q8IVM0 306 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 C3orf20Q8ND61 904 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 RDM1Q8NG50 284 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 CPA5Q8WXQ8 436 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 ERGIC2Q96RQ1 377 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 CDT1Q9H211 546 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 METTL14Q9HCE5 456 aaKnown RBP14.03□□□□□ -0.16
TOP3B-202ENST00000398793 HAUS2Q9NVX0 235 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 GNA14O95837 355 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 STAG3L1P0CL83 205 aa14.03□□□□□ -0.16
TOP3B-202ENST00000398793 CCL23P55773 120 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms