RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 ASPRV1Q53RT3 343 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 ZNF569Q5MCW4 686 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 TRIM68Q6AZZ1 485 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 CRTC1Q6UUV9 634 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 USP17L1Q7RTZ2 530 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 HEATR3Q7Z4Q2 680 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 ANKRD42Q8N9B4 389 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 CCHCR1Q8TD31 782 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 HERVK_113Q902F9 699 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 VPS16Q9H269 839 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 CEP72Q9P209 647 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 NR2E3Q9Y5X4 410 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 ZNF646O15015 1829 aaPredicted RBP11.43□□□□□ -0.58
MSL3-207ENST00000398527 A0A1W2PQ67 120 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 NUBP1P53384 320 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 STK11Q15831 433 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 PPP1R15BQ5SWA1 713 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 BZW1Q7L1Q6 419 aaKnown RBP11.43□□□□□ -0.58
MSL3-207ENST00000398527 CPXCR1Q8N123 301 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 SLC44A5Q8NCS7 719 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 BCL7CQ8WUZ0 217 aaPredicted RBP11.43□□□□□ -0.58
MSL3-207ENST00000398527 INTS12Q96CB8 462 aaKnown RBP11.43□□□□□ -0.58
MSL3-207ENST00000398527 WNK4Q96J92 1243 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 FAM20AQ96MK3 541 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 HTATIP2Q9BUP3 242 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 FUT8Q9BYC5 575 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 EDEM3Q9BZQ6 932 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 LZTFL1Q9NQ48 299 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 SEC63Q9UGP8 760 aaKnown RBP11.43□□□□□ -0.58
MSL3-207ENST00000398527 HMGXB4Q9UGU5 601 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 PNMA8BQ9ULN7 279 aaPredicted RBP11.43□□□□□ -0.58
MSL3-207ENST00000398527 DAGLAQ9Y4D2 1042 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 TTC26A0AVF1 554 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 ANO9A1A5B4 782 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 ZBTB39O15060 712 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 NCK2O43639 380 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 SMIM24O75264 130 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 PBLDP30039 288 aaPredicted RBP11.42□□□□□ -0.58
MSL3-207ENST00000398527 CYLC1P35663 651 aaPredicted RBP11.42□□□□□ -0.58
MSL3-207ENST00000398527 NAPAP54920 295 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 GTF2IP78347 998 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 CETN1Q12798 172 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 PAPD7Q5XG87 772 aaKnown RBP11.42□□□□□ -0.58
MSL3-207ENST00000398527 WDR93Q6P2C0 686 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 CAND1Q86VP6 1230 aaKnown RBP11.42□□□□□ -0.58
MSL3-207ENST00000398527 SLC35F6Q8N357 371 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 CDC26Q8NHZ8 85 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 CPLX3Q8WVH0 158 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 MAIP1Q8WWC4 291 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 ZNF606Q8WXB4 792 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 RUBCNQ92622 972 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 STAMQ92783 540 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 SLC10A4Q96EP9 437 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 TRIM47Q96LD4 638 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 ZC3H12CQ9C0D7 883 aaKnown RBP11.42□□□□□ -0.58
MSL3-207ENST00000398527 SMYD2Q9NRG4 433 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 PCMTD2Q9NV79 361 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 SMCO2A6NFE2 343 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 MAP3K7O43318 606 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 PFDN1O60925 122 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 LINGO3P0C6S8 592 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 PLCG1P19174 1290 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 DNAJA1P31689 397 aaKnown RBP11.42□□□□□ -0.58
MSL3-207ENST00000398527 PSMC4P43686 418 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 KLC1Q07866 573 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 NFE2L1Q14494 772 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 CENPPQ6IPU0 288 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 TRAPPC11Q7Z392 1133 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 ZER1Q7Z7L7 766 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 EXOC3L1Q86VI1 746 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 APLFQ8IW19 511 aaPredicted RBP11.42□□□□□ -0.58
MSL3-207ENST00000398527 SYTL1Q8IYJ3 562 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 RNF25Q96BH1 459 aaPredicted RBP11.42□□□□□ -0.58
MSL3-207ENST00000398527 CALML4Q96GE6 196 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 PURBQ96QR8 312 aaKnown RBP11.42□□□□□ -0.58
MSL3-207ENST00000398527 RAB34Q9BZG1 259 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 OSBPL2Q9H1P3 480 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 ANKZF1Q9H8Y5 726 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 ZNF180Q9UJW8 692 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 ATP11BQ9Y2G3 1177 aa11.42□□□□□ -0.58
MSL3-207ENST00000398527 C17orf113A0A1B0GUU1 675 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 FAM170AA1A519 330 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 CTAGE15A4D2H0 777 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 G3V3G9 751 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 YKT6O15498 198 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 TSPAN6O43657 245 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 EXTL3O43909 919 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 CTAGE8P0CG41 777 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 GABPAQ06546 454 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 LAMC2Q13753 1193 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 LONRF2Q1L5Z9 754 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 DCAF8Q5TAQ9 597 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 UNC13DQ70J99 1090 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 CTAGE6Q86UF2 777 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 CCDC50Q8IVM0 306 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 CTAGE4Q8IX94 777 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 REXO1Q8N1G1 1221 aaKnown RBP11.41□□□□□ -0.58
MSL3-207ENST00000398527 DEFB123Q8N688 67 aa11.41□□□□□ -0.58
MSL3-207ENST00000398527 SLC22A8Q8TCC7 542 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms