RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 GPR62Q9BZJ7 368 aa18.75■□□□□ 0.59
CSNK1D-204ENST00000398519 ARMCX3Q9UH62 379 aaPredicted RBP18.75■□□□□ 0.59
CSNK1D-204ENST00000398519 POLR2BP30876 1174 aaKnown RBP18.74■□□□□ 0.59
CSNK1D-204ENST00000398519 ADGRE1Q14246 886 aa18.74■□□□□ 0.59
CSNK1D-204ENST00000398519 CCDC40Q4G0X9 1142 aa18.74■□□□□ 0.59
CSNK1D-204ENST00000398519 TRAPPC11Q7Z392 1133 aa18.74■□□□□ 0.59
CSNK1D-204ENST00000398519 FRMD5Q7Z6J6 570 aa18.74■□□□□ 0.59
CSNK1D-204ENST00000398519 GUCD1Q96NT3 240 aa18.74■□□□□ 0.59
CSNK1D-204ENST00000398519 PUF60Q9UHX1 559 aaKnown RBP18.74■□□□□ 0.59
CSNK1D-204ENST00000398519 SF3B1O75533 1304 aaKnown RBP eCLIP18.73■□□□□ 0.593e-6■■■■■ 47.9
CSNK1D-204ENST00000398519 ATG2AQ2TAZ0 1938 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 I3L4J1 428 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 IKBKBO14920 756 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 CSPG5O95196 566 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 FGFR1OPO95684 399 aaKnown RBP18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 GNA14O95837 355 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 BRCC3P46736 316 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 AP3M2P53677 418 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 MARSP56192 900 aaKnown RBP18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 PPP3CAQ08209 521 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 TPD52L1Q16890 204 aaPredicted RBP18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 TDRD10Q5VZ19 366 aaKnown RBP18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 TAS1R1Q7RTX1 841 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 IRF2BP1Q8IU81 584 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 VPS52Q8N1B4 723 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 ENOX1Q8TC92 643 aaKnown RBP18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 CDX2Q99626 313 aaPredicted RBP18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 METTL14Q9HCE5 456 aaKnown RBP18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 TLR9Q9NR96 1032 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 MTMR10Q9NXD2 777 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 AGAP1Q9UPQ3 857 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 NUB1Q9Y5A7 615 aa18.73■□□□□ 0.59
CSNK1D-204ENST00000398519 SPTLC1O15269 473 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 C4BPAP04003 597 aaKnown RBP18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 SOD2P04179 222 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 KRT19P08727 400 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 AARSP49588 968 aaKnown RBP eCLIP18.72■□□□□ 0.595e-7■■■■■ 34.9
CSNK1D-204ENST00000398519 LILRA4P59901 499 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 ERVFC1P60507 584 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 DCAF17Q5H9S7 520 aaPredicted RBP18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 SLC35C1Q96A29 364 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 HERC2P3Q9BVR0 1158 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 LMAN2LQ9H0V9 348 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 ZBP1Q9H171 429 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 THAP9Q9H5L6 903 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 STK39Q9UEW8 545 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 REV3LO60673 3130 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 SCN1AP35498 2009 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 IRS1P35568 1242 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 GCLMP48507 274 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 RBP5P82980 135 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 ZACNQ401N2 412 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 TIGD5Q53EQ6 642 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 TCERG1LQ5VWI1 586 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 C15orf39Q6ZRI6 1047 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 SV2AQ7L0J3 742 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 LRRC52Q8N7C0 313 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 MYLIPQ8WY64 445 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 MRPL38Q96DV4 380 aaKnown RBP18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 B3GALT6Q96L58 329 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 CNOT6LQ96LI5 555 aaKnown RBP18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 TCF25Q9BQ70 676 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 MMRN2Q9H8L6 949 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 NFE2L3Q9Y4A8 694 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 PCDHGC5Q9Y5F6 944 aa18.72■□□□□ 0.59
CSNK1D-204ENST00000398519 EYSQ5T1H1 3165 aa18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 FSCN2O14926 492 aa18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 CST3P01034 146 aaPredicted RBP18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 TAF6P49848 677 aa18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 MYL5Q02045 173 aa18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 ELAVL2Q12926 359 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 BIRC3Q13489 604 aa18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 PTPROQ16827 1216 aa18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 FAM171A1Q5VUB5 890 aa18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 TRIM59Q8IWR1 403 aa18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 SUSD3Q96L08 255 aa18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 ZNF560Q96MR9 790 aa18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 NAT10Q9H0A0 1025 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 ENTPD7Q9NQZ7 604 aa18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 CHST7Q9NS84 486 aa18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 SAMSN1Q9NSI8 373 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-204ENST00000398519 MYO9BQ13459 2157 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 VWA8A3KMH1 1905 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 TRAPPC3O43617 180 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 VNN1O95497 513 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 CTSAP10619 480 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 POU3F3P20264 500 aaPredicted RBP18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 GTF2H1P32780 548 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 PNPLA4P41247 253 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 HSP90AA4PQ58FG1 418 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 RTP2Q5QGT7 225 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 TMC7Q7Z402 723 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 AUTS2Q8WXX7 1259 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 GAS2L1Q99501 681 aaPredicted RBP18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 BPIFA3Q9BQP9 254 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 TMEM8AQ9HCN3 771 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 LMCD1Q9NZU5 365 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 MTCH2Q9Y6C9 303 aa18.7■□□□□ 0.58
CSNK1D-204ENST00000398519 M0QZQ0 153 aa18.69■□□□□ 0.58
CSNK1D-204ENST00000398519 STX10O60499 249 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms