RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CFAP221Q4G0U5 840 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 RNASEH2BQ5TBB1 312 aaKnown RBP6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 MRPL10Q7Z7H8 261 aaKnown RBP6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 CCDC50Q8IVM0 306 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 SHCBP1Q8NEM2 672 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 FAM71BQ8TC56 605 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 SYMPKQ92797 1274 aaKnown RBP6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 HOOK2Q96ED9 719 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 ATP6V1G3Q96LB4 118 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 AIFM2Q9BRQ8 373 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 PDE11AQ9HCR9 933 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 RAB21Q9UL25 225 aa6.99□□□□□ -1.29
TM9SF4-202ENST00000398022 TCRBV5S4A2TA0A5A2 114 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 LRRIQ3A6PVS8 624 aaPredicted RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 FAM155AB1AL88 458 aaPredicted RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 B4DLN1 442 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 TNFRSF10AO00220 468 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 MAP2K7O14733 419 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 FANCGO15287 622 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 SIN3BO75182 1162 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 GLI1P08151 1106 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 PSMC4P43686 418 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 GRIN1Q05586 938 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 KDSRQ06136 332 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 CKAP4Q07065 602 aaKnown RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 TTC38Q5R3I4 469 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 KLC3Q6P597 504 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 INTS5Q6P9B9 1019 aaKnown RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 RAD9BQ6WBX8 426 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 ARHGAP36Q6ZRI8 547 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 STK32CQ86UX6 486 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 SLC35F6Q8N357 371 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 FBXO30Q8TB52 745 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 ACAP3Q96P50 834 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 YIPF3Q9GZM5 350 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 CRISPLD2Q9H0B8 497 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 CAB39Q9Y376 341 aaPredicted RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 RTCBQ9Y3I0 505 aaKnown RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 PAPPA2Q9BXP8 1791 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 GPR75-ASB3A0A0A6YYF3 556 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 FAM221AA4D161 298 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 GSG1L2A8MUP6 293 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 KRIT1O00522 736 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 POLR2BP30876 1174 aaKnown RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 KRT9P35527 623 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 IGHMBP2P38935 993 aaKnown RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 IL1RL1Q01638 556 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 PPARAQ07869 468 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 IFIT1BQ5T764 474 aaKnown RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 CDKAL1Q5VV42 579 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 MAGEC3Q8TD91 643 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 PXYLP1Q8TE99 480 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 FAM149B1Q96BN6 582 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 OPTNQ96CV9 577 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 CDCA5Q96FF9 252 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 RADILQ96JH8 1075 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 MFSD14AQ96MC6 490 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 HS6ST2Q96MM7 605 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 GAL3ST1Q99999 423 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 GPATCH1Q9BRR8 931 aaKnown RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 SPTBN5Q9NRC6 3674 aaKnown RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 RASSF1Q9NS23 344 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 COG5Q9UP83 839 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 ZBTB1Q9Y2K1 713 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 hCG_1642624A0A1W2PR95 340 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 RIPK2O43353 540 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 PGRP06401 933 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 HOXB1P14653 301 aaPredicted RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 TYRP1P17643 537 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 PMLP29590 882 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 BEX3Q00994 111 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 ZNF565Q8N9K5 539 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 CASP10Q92851 521 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 LSM14BQ9BX40 385 aaKnown RBP6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 TFCP2L1Q9NZI6 479 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 VPS54Q9P1Q0 977 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 RWDD2AQ9UIY3 292 aa6.98□□□□□ -1.29
TM9SF4-202ENST00000398022 SLC12A8A0AV02 714 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 TRDMT1O14717 391 aaKnown RBP6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 PFDN1O60925 122 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 KRT4P19013 534 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 COPB1P53618 953 aaKnown RBP6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 KLC1Q07866 573 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 DPYDQ12882 1025 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 CUL1Q13616 776 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 SLC44A4Q53GD3 710 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 ARHGAP11AQ6P4F7 1023 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 B3GNT6Q6ZMB0 384 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 BNC2Q6ZN30 1099 aaPredicted RBP6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 ZNF619Q8N2I2 560 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 VGLL2Q8N8G2 317 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 CAGE1Q8TC20 777 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 MROH8Q9H579 483 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 HAUS4Q9H6D7 363 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 LIMA1Q9UHB6 759 aaKnown RBP6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 TAF1P21675 1872 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 TNKSO95271 1327 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 LOC102724428A0A0B4J2F2 783 aa6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 DNAJC8O75937 253 aaPredicted RBP6.97□□□□□ -1.29
TM9SF4-202ENST00000398022 LTA4HP09960 611 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms